NONHSAT128364
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT128364 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
848 nt |
Genomic location |
chr8+:116893761..116905075 |
Exon number |
7 |
Exons |
116893761..116893781,116894950..116895064,116896197..116896461,116896752..116896823,116897587..116897734,116899433..116899468,116904885..116905075 |
Genome context |
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Sequence |
000001 CCAAGATCAA TCAGAAGAAA Ggtgtgaaaa ttctccatca tcgcagaaag ttctaatgga cagtgctgCt cccaacagaa 000080
000081 agaatggcaa atacacaggt cctgaagagg cggacaacag aagaagtaac aaggagGAAG ATAAGATGGA GTCAGACTTC 000160 000161 AAGGAGGAAA TTGGAGAAAA TGCATTTAAG AGAAAGAAAA AATGAGGATC AATCAGGCTG AAGTGAATAG TTACAATTTG 000240 000241 CCTACAGCCC GGCATAACTA CTATCATGAT CTAACTATGG GGAAAAATGT TTTAAAGTAC AATTTTCACA TAAATCAAGT 000320 000321 AGCACATGAA GAGGAAAAAT AAACCTAATA TTGCCTTTAG GAGTATCCGC ATATTAGTGA AGGACTATGT AAAGGTGTCT 000400 000401 GCAAGAATCT GCATAGAAGT AATCATTTCT GGAAATCCAG ATTACTTAGT GGCATCTGCT GAAACACAGA TGAGTTAAAA 000480 000481 TACTTGTTAT GAAGAGGGCC TGTACCAATG ATTTTGATCT TTCATTAAAA AAGGAAATTT CAAGCTCTTA GAAACAAAGA 000560 000561 AAAAATAAAC GAGTGTTACA AGAATGTTTT AAGCATTCCG TAGATGGCTC AAGAATAGTA TATGCAGGGC TGCCTTTTAC 000640 000641 ATTTAGGGCT GGACTGGGAC ATGGTACGTA GGAAATTgca tggtgaagtg gtacaagcat caggctcaag aatgagagtc 000720 000721 cagtttgaca gaccagatga agaagtgatt aagaccatag ttctggactt agacaagcct ggctttgtga ctttggacaa 000800 000801 attatttgat aactgtaagt gtatttatca ctaaaaggca gataataa |
Predicted Small Protein
Name | NONHSAT128364_smProtein_83:220 |
Length | 46 |
Molecular weight | 5569.3125 |
Aromaticity | 0.0222222222222 |
Instability index | 116.277777778 |
Isoelectric point | 11.4978637695 |
Runs | 7 |
Runs residual | 0.00669191919192 |
Runs probability | 0.0305852070558 |
Amino acid sequence | MANTQVLKRRTTEEVTRRKIRWSQTSRRKLEKMHLRERKNEDQSG |
Secondary structure | LLLLEELLLLLLHHHHHHHHHHLLLHHHHHHHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |