NONHSAT128365
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT128365 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1341 nt |
Genomic location |
chr8+:116918166..116928403 |
Exon number |
2 |
Exons |
116918166..116918413,116927311..116928403 |
Genome context |
|
Sequence |
000001 CTAGGATCTC CAACTGTTGC ACCTTTCTTC AAAGATACGG GCTTCTACAA GGTTTTCATC ATAGCTACTA CAACAGGAGG 000080
000081 TCCAGTAGCT CTGGGCTCAA TGCCAAAGCA ACCAGATCCA TGGAGTCTCT GGCCTCTACG TGGCTAACCA GAAGGCTTGG 000160 000161 CAAATTCAGG CTGGAAATAC AGAACATGTA ATAGTTTGTC GGACAACTTT TAACCCAATA TGGACAAGAT ATGGGAAGAA 000240 000241 GCACACAATC TTTTCTAGGA CACATCATTT TAAGGGAAGA TGGGAGAGAT ATGAAGAAGC AGCTGTGGAG ATGCAACGCT 000320 000321 GGACATGAAA TGGGTGTGGA AGACAACGGA AAGCCAGTTG GTCAAGACCC TTGGGAAGAA AAGAATCTTT AAAAGGTCTC 000400 000401 TGTTAGCGTG GGACTAAATT GTAATCAGAC ATTGTGAATA AGATGAAATA CTAAAGAAAG AAAGAAAGAA AAATATAGGG 000480 000481 CACATACAGA ACTGATCAAG AAGGGATTAT CAAGAGACAA TTACTCAACT ACCCATTTGC AAGTGAGCAT ATTCTCACCC 000560 000561 AACACTGTTT TCAGTTATGA TTGAATGGAA GCTCTAATTG AATAGTTCTT TGTGGTGTTC AAAGTCCAAG ACAGCAAGTT 000640 000641 GTTCTTTTGT ATGGGTTCAT AAGTTTTCCC AGAATGAACT GTAAAACACT CATGATTTCC CTGAACTGTG GCAAAGTGAC 000720 000721 TTACCCAGTT TCTGGCAAAT TTATTAAGCA ATACAGACTC CCTGCTTAAT CCATTGGTTT AAACAATATT CAGTTAACAC 000800 000801 AAATTAGTGA ATAAGCAGAG ACATAGGTCA GCTGATCGAA GAAAGATGTA AAAGtaaatt aaaataaaat ttatttGAAA 000880 000881 ACAGCAATGG GTCAGAGCTA AAGCCCAGTA CAAGTTAGAA CAAATAAAAA CCCATTAATC TGAAAAACCT TCTTGGGTTT 000960 000961 ACAAGAAGGC TTTTCTGATC TCAGGCTGTA TTTATCCTCT AGATGGAAAA AAAAGAGGAG CAATAAATCT CTTCATATCA 001040 001041 AAGGCCTGTT CAGCAGAAAT GAATTGAAAG TGTTGGGTCA ATTAGACTGA ACTAGATCTC CCCCAGGCAA ACCTACTATC 001120 001121 GATACATATT TAGCTTCCAG ACACCTTTAA AGGCAGCCTG GGAAAGGCTG GCTAGCAAAG AAAAAAAAAG ATAATTCTAA 001200 001201 AATTTGAGTT CCCTTTGAAC TCCATCCACT ACAGCAATAA AAAGAGCTGT TTCTGCTCTA TTGCATTTTG TTGAAACAAA 001280 001281 AAAAAAATAG ACTGGAGAAA TGAATAAGCT CGGCATATTA TGTagataaa atggtattat g |
Predicted Small Protein
Name | NONHSAT128365_smProtein_230:391 |
Length | 54 |
Molecular weight | 6095.7989 |
Aromaticity | 0.0566037735849 |
Instability index | 62.1377358491 |
Isoelectric point | 6.03985595703 |
Runs | 9 |
Runs residual | 0.00954901058444 |
Runs probability | 0.0390979214509 |
Amino acid sequence | MGRSTQSFLGHIILREDGRDMKKQLWRCNAGHEMGVEDNGKPVGQDPWEEKNL |
Secondary structure | LLLLLLLLLLEEEEELLLHHHHHHHHHHLLLLLLEEELLLLLLLLLLHHHLLL |
PRMN | - |
PiMo | - |