NONHSAT129284
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129284 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
510 nt |
Genomic location |
chr8+:136303419..136308995 |
Exon number |
3 |
Exons |
136303419..136303595,136306037..136306113,136308740..136308995 |
Genome context |
|
Sequence |
000001 GTCTCTGCAT TTGTCCGCGT TCTTCACTGT CATGTGGCTC CTCCCGATGT GATAGCAAAG ATGCCCGTGG ACAAACCAGG 000080
000081 CTTGGGTCCA TCATGTTGGC AATCTGGAGG AAGCCGAGCA CTTTTTCTCC AACTGACTCA GTCCCAGGAC TGGCTCTCAT 000160 000161 TTGCCCAGCT TGTGCAGTGC TCAATGTTAC AGCTTCAAAC ATAGAAGATA CAAGAAGTAA ATGCTGAGAT TTCGCTATTT 000240 000241 GTTAACCTAT CATGTGATGA ACCTATACAA ATTGTGTAAA GCAAATGTTT TCAGGCATTG GATGTCAAGC AGCACAGGAC 000320 000321 TATCAACCTG AAGGAAAGAG AATCACACAA GATGAGCCTC ATATTTATCC TGGCTTTCCG CTTCGGAGCA CTCTCTCAAC 000400 000401 TTCAACACAG AGAAGTGAAA CCCAAGTGAA AGAGTATTGC TAAACCAAGG AGGCAGACCT CATGTTTGTT CAAGAGTACC 000480 000481 CAAGAGATAG GATCTGTAAG AGGCACACAG |
Predicted Small Protein
Name | NONHSAT129284_smProtein_284:442 |
Length | 53 |
Molecular weight | 5881.4581 |
Aromaticity | 0.0961538461538 |
Instability index | 62.0 |
Isoelectric point | 5.59576416016 |
Runs | 8 |
Runs residual | 0.00347674923946 |
Runs probability | 0.0319841900724 |
Amino acid sequence | MFSGIGCQAAQDYQPEGKRITQDEPHIYPGFPLRSTLSTSTQRSETQVKEYC |
Secondary structure | LLLLLLLLHHHLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLHHHEEEEL |
PRMN | - |
PiMo | - |