NONHSAT129361
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129361 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
2519 nt |
Genomic location |
chr8-:141111257..141113775 |
Exon number |
1 |
Exons |
141111257..141113775 |
Genome context |
|
Sequence |
000001 AGTAATATGG TATCAACTAT TCTTCATTGC TACTTATTAG ATTCTAGGCA CTATTCTAAG ATTTCACATC AGGACTTTTC 000080
000081 AACAGCAGCA CTATGACATT TTTTCTAGAT AATTCTTTGC GGTTGGAGGG GGCTACAGGA TATAGGATGT TTAGGAGCAT 000160 000161 CCCTCACTTC AACCCACTGG AGGCCAGTAG GGTCCCTTCC TGCCCCAATC GCTTGTACCA ACCAGGATGT CAACCAGATA 000240 000241 TTGCCAAAGC TCCCCTGTGG GTGGGGTTGG GGACAGAATT GCCCCTGATG AGAGGCGCTG CCTCACGTGA GCTCTGTCAT 000320 000321 TTAATCTTCA CAATTCTCCG AGGTGGGTCC TATTACTAGT CCTGGTTTAC AGATGAGGAA ACTGAGGCAC AGGGAGGTAA 000400 000401 ATATTTGCCC CGATAATGCT GCACTAAAAA TGCTTCTGAA AAAGGGAAGC TCGTAAACAA TTGTCATCGA GGGTCTGGAA 000480 000481 GAGAGCGCTG ATGTAATTAA GGAGGGTGTC TCAGGCTGAG TATGAGGAAA CCCTACTGCT AACCCTCTGT TGTTACCTCC 000560 000561 CATCCCTCGG TCCTCTCGTC TGTGCTGTGG GAGTGGGGAG CGGCAGGTCT TTCATGCTCC TTCTGCTAGT GGAATTCCTG 000640 000641 CTTTCTAGCA TCCCTTCATT TCATCACTGG GTGCTTGTTT GCTCAGGATT ATGCCTCATC TTCGTAAGTC AGACATGATC 000720 000721 CTGGCGCTTC AGACACTCAG CTTTGCAACT CCCTCAAAAT GGGAGCCACA GGCATGTGGG GGGTTGAGCT TTATCCTGCC 000800 000801 CAGCCCCTCG CTCAGTGGGG GTGAACAGAG TGAGAGGCAG GACTTGAAAG TATTTGCCCA GAATCATACA GCAAGATAGC 000880 000881 ATCATGTGCA AGAGGCAGCC ATGTGTACTC CGAGTCCACA CTGCCATTCT TGTTGGCCTT TGCAGGCCGG CCTCCTGAAA 000960 000961 AACTTGTCTC TGCTCACTTC TTCAGTCTCT TCTCCTTCTG TCTTCCCTTC AACCTACTCT AATCAGAAGA TAGAGACAGA 001040 001041 AGTAAGCAGT GAACTAGGCA GGACCAAACC AAACCAAGAG TTGTGTGTTG ACCAGCCAAT GAGGAAGTTA TGTGTGGGAG 001120 001121 AGAACATGGT AAACTATGTC TTCTTCTCCC CCATGTCTAT GTCTGTGTGT GTGCGTGCAT GCGTGTGTGT GTGTGTGTGT 001200 001201 GTGGTGGGGG GAGGCTGGTA TTTTATTTAT TGGACAAATA TTTATTGTCT AGCACTATGT GCCAAATACC AACTTAAGAC 001280 001281 ATCTATAAGA ATTTCAATTT CTCTGAGACC CAGGCTAAGA TTTTCCATTA AATTCACATG AGTCTATTAC ATCTCTTTCT 001360 001361 TTCATTTCCA CCTGGGTAGT CAGGAAAACA CATTAGACAT ATTTTTAAAA ATTAAAGTTA ACACAGAGTG TTACAAACTT 001440 001441 TGAGAGAAGC AATAATTTTG AGTTGCACTA GTAATCACAG CAACAACCCC AAATACCACA TTTATTGTCT CTTACAAAGC 001520 001521 ATCATAAGTT ACATTAATCA CTGGTTTTAA CTACATTCTG TTACAGTTTG GACTCTAGTA ACTAGGCAAA TACAAACCAA 001600 001601 CAAAACAGCA TATAAAACCA CATGGAACAA AAAGCACACT ACTCTCCAAT ATGCATTTTC TGGAGCCAAT CTGATATTTA 001680 001681 ACTGGGATAA GACATTCTAA ATAGCAACTG AAATATTGAT ATACCAGAAC ATCATGAAAT AAATATTTTT CCCAACTCTG 001760 001761 AAGACATTCC TTTCCTCATG CAAAATTTAC CAAAAAGAAA AAAAAAAAGG AAAAAACAAA AAATAAACAA AAAACCAGGC 001840 001841 TGGGCATGGT GGCTCACACC TGTAATCCCA GCTTGGGAGG CCGAGGTGGG TGGATCACCC GAGGTCAGGA GTTTGAGACC 001920 001921 AGCCTGGCCA ACATGGTGAA ACCTTATTTC TACTAAAAAT ACAAAAATTT GCTGGATGTG GTGGTGCATG CCTGTAATCC 002000 002001 CAGCTACTTG GGTGGCTGAG GCAGGAGAAT CGCTTGAACC CAGGAGGCGG AGGTTGCACT GAGCCGAGAT TGCACCATTG 002080 002081 CACTCCAGCC TGGGTGACAA GACCAAAACT ACGTCTCAAA AAAAAAAAAA AAAAACAAAA AAAAGAAAAC CCTACAAAAC 002160 002161 CAACCCAAGT TCATAGTAAC CAGAATTTTC AAATATTTCT CTGTGATCAG CACCTAAAAA TGTATTTTAA AATGCTTATT 002240 002241 TTAATGGCCA GGCACAGTGG CTCAGGCCTG TAATTCTAGC TGGGAGGCAG AGGCGGGTGG ATCACCTGAG GTCAAGAGTT 002320 002321 CAAGACCAGC CTGGCCAACA TAGTGAAATC CCATTTCTAG TAAAAATACA AAAATTAGGC ATCGTAGTGT GGACCTGTAG 002400 002401 TTTCAGCTAC TTGGGAGGCT GAGGCAGGAG AATCGCTTGA ATCTGGGAGG CAGAGGCTGG AGTTAGCCAA GATGGCACCA 002480 002481 TTGCACTCCA GCCTGGGTGA CAGAGCGAGA CTCCGTCTC |
Predicted Small Protein
Name | NONHSAT129361_smProtein_92:358 |
Length | 89 |
Molecular weight | 9888.3996 |
Aromaticity | 0.113636363636 |
Instability index | 42.3034090909 |
Isoelectric point | 9.01800537109 |
Runs | 13 |
Runs residual | 0.0163636363636 |
Runs probability | 0.0333523568819 |
Amino acid sequence | MTFFLDNSLRLEGATGYRMFRSIPHFNPLEASRVPSCPNRLYQPGCQPDIAKAPLWVGLG TELPLMRGAASRELCHLIFTILRGGSYY |
Secondary structure | LEEEEELLLEEELLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEELLL LLLHHHLHHHHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |