NONHSAT129839
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129839 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1239 nt |
Genomic location |
chr8-:146050517..146051860 |
Exon number |
2 |
Exons |
146050517..146050592,146050698..146051860 |
Genome context |
|
Sequence |
000001 ACCCCCGCCC CTGCTGCCCC GAGTTCGGCT CCCTCAGCCC CACATCCTCT CTGGTCATCT AAGTGGACTG CAGCTGCTCA 000080
000081 GGGAGCATGT CGCGAAGGAT AGGGAAGGAC AGGGGGTCTG CTTCCCCAGC CGCCCTCCAG ACCCCCAGGG CTGGTAGGGG 000160 000161 CCGGCAACCC TATGCCCCAA CCTGGCCTGC TGCAGGTGAG GGGGGCACAC CAGGGTAACA CAGGAGCAGG AGGGGGAGAA 000240 000241 AGCCTGGCTA GAGCATCCAC CTCATAGGCA CCTTCCTTGT GTCCAGGGTG CAGATGCCAG GGCTCTGAGG CCCTGAGGTC 000320 000321 CTGTCTGGGG CGAGGGGGCT TCCTCCATCC ACTGCATCCA CTGCCCGGCT GAGTCTAGAG GCCACTGAGC AAGCAGACCC 000400 000401 TCCAAAGCCA GGCACACTCA GGCCCTCACA TGGTCACGGT GCTTATGCTC TGGGCCAGCC TGGATTGCTC ATCCCTAGCT 000480 000481 GAGATTGGGA TTCACagggt cttccagttc ccccttttct ttctctactg attgagaaac acagagtcct ttgattgctc 000560 000561 tgggacctgg ccattgcgtg ttccctgcag ccttgaaccc agttcaatgg ggccgggcac attccctgat aaagctgttt 000640 000641 aggttgcttg aaaacacaat caaccctatt gctaaacacg tagaaactgg ccctgccctg agtccaatcc cttaaactct 000720 000721 catctaagct ccatagccag agtcccttgc tgcaaatgta cctgggtgga gcatcccttg cctcatcatc gatcccaaga 000800 000801 aagctgaagc tccatgtgaa aatttccgga agaaatgctc tggactgatc accctggcgt ttagagcttc tttccttgga 000880 000881 atcccaacca attccatcgc gggactgttt ggggaagtct tttgaggcaa ctcccttgct gccacttttg gggcaactct 000960 000961 agccTCCTCA TATTTGGCCA GATAGAACAG TTCCAAGCTG TAAATGTTTC CAGGAAAAAA TCTCAACTAC AAAGACACTT 001040 001041 TCAAGGTGCT GCATTTCCAA CAGCACTCTC CGTATCCGAG TGGACAGCCC AGAGCAATGG TGCTTCCAAT CCACAGAGCC 001120 001121 CCTCCACAGG TCCCTTGCCA TCTGCAGACA CCCACATCTC AAGgctggag tgcaatgaca gtctcagctc actgcaacct 001200 001201 ctgctcccgg gttcaagcga ttctcctgcc tcggcctcc |
Predicted Small Protein
Name | NONHSAT129839_smProtein_86:217 |
Length | 44 |
Molecular weight | 4391.8464 |
Aromaticity | 0.046511627907 |
Instability index | 69.7046511628 |
Isoelectric point | 11.7113647461 |
Runs | 5 |
Runs residual | 0.0410243010191 |
Runs probability | 0.01294824236 |
Amino acid sequence | MSRRIGKDRGSASPAALQTPRAGRGRQPYAPTWPAAGEGGTPG |
Secondary structure | LLLEELLLLLLLLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |