NONHSAT130867
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT130867 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1461 nt |
Genomic location |
chr9+:34568016..34571290 |
Exon number |
2 |
Exons |
34568016..34568155,34569970..34571290 |
Genome context |
|
Sequence |
000001 GGCAGAGCCC AGCCACCAGG GTCTGCTCCA TGCCTGGTCC CTGGAGAGGC CCTCACCCTC TCTGCTTTCA CCCAACCCGA 000080
000081 CTGACACGGA GTAGGAGGTG GGAATCATGC AGGCAGGGAG CTTAGGAAGC CTGGTTCAAG CACACACCTA CACTTGATGG 000160 000161 CAGGGAAATA ATTATTTCCT GCAGAATGGG CTGCAAATGT AACAAACCCC CTGACCTTCA GTCTGAAGAG AGAGAACTAT 000240 000241 CAACCACACA GAAGCAAAGA TCCAGAGAAA TACTGAGGGA TGCTACCAGA CACTCAACCA GGGCCACTCT CCGAGATTCC 000320 000321 AGCCAGCCAC ACAGCAAAGA TGCTGGCCGG GGACACTGCC CCAAACCACC AGACAGAACC CCAAAGAAAC AGCTCCACAC 000400 000401 ACAGTGGAAG ATACACCAGA GACTGTTAGA AGGACCATCA GACAAAGCCA AAGAGACAGG TAGATGAAAC CAGATAACCA 000480 000481 GCCAGAGAGG TGGTCAGAGA ACAGCGACAC AATCAAAGGA CCCACCAGAA ACACTGTAAA GGACTCAGCT AGACCCAGGC 000560 000561 AGATACACTG CCGAAGGACG AGCAAGGAGC ACAGGCAGTG AAGCCGTCGG CGACAAAGCC AGAGAGCTAA GACACTGTCA 000640 000641 GAAACAGTGC CAGAGAAACC GTCTGACACA CAAGCAGAGA AATACCAGAG AAACTGATAG ACGCAAACAG GCGTACACCC 000720 000721 AGAAAAACAG CTTGAGAGAA GAGCCAGAGC CACAGCCAGA TGCTCAGTCA GGAAGTATCC ACACCACTCC AAacactgcc 000800 000801 agagacactg tcagacacac agtcagacac actgccagag acaccgttat aaagactgcc agagaaacag ccagacacac 000880 000881 agccagaaaa actgacagag acgcagtgcc agatataccc cgagaaagtg ccagagactc agctccagac agtgcagaca 000960 000961 tagcataaca gagacaaaTG TGGGTATCAG CCTGAAGCAG CTGCGGAGAG GCTGGAGAGC AATGAACTTC CTGGGGCTTC 001040 001041 CTGTGGGAGA GGGCTCCTGC CTGCCTTTTG CTACCCTTGA CCCTCTCCAG GAAAGTCCCC TCCTCTGAGC CTGCTTTTCC 001120 001121 TTTCCTCCCT GTCACAGCCA CAGGTGCCCT GACTGCCCCT CCCTGGCACA GTAAATCTCT CTGTGTCCTA AGTGGCCCCA 001200 001201 GCTACCCTTT GCGCATCAGT GACTCCTGGA GCCTTAGCTA CCACTTGGCC TGGCTCCTTC TGACCCTCAG CCCCTCACCA 001280 001281 CTCTTCAGCT ACTCctcagg cctaggaggt taagacaatg gccaaagtta cacagccagc aagccgtgca gccaggaaat 001360 001361 gaacccagga ctgcctgaat tcagagctgg tgTAAGAGAG AGAAAACGAG ACCAGCAGCC AGAGGCCTAC CTGGTTCCCC 001440 001441 AACCTCAGCC CTGGCCAGTC G |
Predicted Small Protein
Name | NONHSAT130867_smProtein_185:466 |
Length | 94 |
Molecular weight | 10676.8852 |
Aromaticity | 0.010752688172 |
Instability index | 56.2365591398 |
Isoelectric point | 10.0252075195 |
Runs | 13 |
Runs residual | 0.00886101154918 |
Runs probability | 0.0345277404101 |
Amino acid sequence | MGCKCNKPPDLQSEERELSTTQKQRSREILRDATRHSTRATLRDSSQPHSKDAGRGHCPK PPDRTPKKQLHTQWKIHQRLLEGPSDKAKETGR |
Secondary structure | LLLLLLLLLLLLLHHHHLLLHHHHHHHHHHHHHLLLLLLEEEELLLLLLLLLLLLLLLLL LLLLLLHHHHLHHHHHHHHHHLLLLHHHHHLLL |
PRMN | - |
PiMo | - |