NONHSAT131507
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT131507 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1393 nt |
Genomic location |
chr9-:65696702..65725786 |
Exon number |
7 |
Exons |
65696702..65697375,65697732..65697873,65705306..65705431,65705959..65706118,65707472..65707645,65707797..65707847,65725721..65725786 |
Genome context |
|
Sequence |
000001 ATAAAGAGAT GTGATTTTTT AAAAAACTCC CTTTTTATGA AATTATTTTC TCTACTAAAC TGCTATCTTT GGAAACCCAA 000080
000081 CTCACCATTA AATTGCAGCG TCTTAAATTG TACTCTCACT CTTTTCGTGT TCGTTTTTGC CATCGAGGAC ATCAACAGGG 000160 000161 GCCCGCTGCT CTTACTCTAC ATGTCTTTGG GGTATCACGT CTACAATACC TACCACATTA ATCAGAGGAC TTTGGAGGGC 000240 000241 CCTCTGTTTT GGCTGTCAGG AGGGGCCGAG AACCTTCCCA ATTATACATG TCCATTTGAT CCTTTGCCTA ATGATGAAGG 000320 000321 ACAGTTTCCA TCTCTGTATC AGATGGTCCC AAGGAATCAT CTTTGCCTCT TGGCATGGTG AAGCTGTTGC AGCATTTTAG 000400 000401 CTAGATCTGG TAGGGCTGCT TGTCTCGGAT GACATAAAAG GTGGGCATTT TGTTACCACC TCCCAGTGGG ACTTTATCAC 000480 000481 ACATGGGGGA AGTTTCATAC TTAATCCATT CCATGGGACT CTCACTTTTT CAAAGCAGAA CAGTGAGATG CCTGGCTTCC 000560 000561 AGCATTTTGT TCAGACAAAT GAATGTGCAA AATGCCCAGA CAACCAGTAT TCAGTGAGAG CGATCACTGC CTCACAGAGT 000640 000641 TGTGACCTTC CTGGACTTTG AAGATGCACT GGGGACAGCA CTGGCCAGCA TAGCTCTCTG TTTCTCTGTC CTCACTGCCA 000720 000721 TGGTTCTTAT GATCTTTGTG AAGCACATAC ACACACTCAT AGTCAAGACT CTCAGCGACA TCTCTCTGTC TGTTTTCTTC 000800 000801 TGCTCCTTGC TCTTCACTGG CTGTACAAAC ACAGTCACTT GTAACCTCTG ACAGACAACA TTTGGAATCA TTTTTACTGT 000880 000881 GGTTGTTTCA ACTGCGTTAG CTAAAACTAT CACTGTGCTT ATAGCCTGTA AGGCTACAGC ATCAGAGAGA AAGCCAAAGT 000960 000961 GGTTTTGGGG ACCGGGAGTA TTTAGCACAG TTATTTTCAT CTGTTTCCTT ATCCAAGTAA CTCTCTGGAA TTTGGCATGG 001040 001041 GATCAAAGAG TGCCATCAGG ACTCTCAATG ATGAGGTATT CTTTGCCTTC CACTCTGTTC TGGGATTCTT GACCTTTTTG 001120 001121 GCACTGGGGA GCTTCATCTT GGCTTTCCTG GCCAGGAGCC TGCCTGACAC CTTCAATGAA GCCAAGTTCT TGATGTTCAG 001200 001201 CATGCTGATG TTATGTACTG TTTGAATTAC CTTCCATACT GTGTAACATA GCACCAAAGG GAAGGTCATG GTTGCCTTGG 001280 001281 AAATATTCTC CACCTTGACT TCCAGTGCTG AGTGCTAGGT GGTATCTTTG CTCCCAGAGG CCGTATTATT CTAATAAAAC 001360 001361 CAGATAAGAA TACTCTTGGA GAGTTAAGGA AAA |
Predicted Small Protein
Name | NONHSAT131507_smProtein_482:616 |
Length | 45 |
Molecular weight | 4947.6936 |
Aromaticity | 0.0681818181818 |
Instability index | 42.7363636364 |
Isoelectric point | 9.49310302734 |
Runs | 7 |
Runs residual | 0.00401069518717 |
Runs probability | 0.0323390617509 |
Amino acid sequence | MGEVSYLIHSMGLSLFQSRTVRCLASSILFRQMNVQNAQTTSIQ |
Secondary structure | LLEEEEEELLLLLLHHHLHHHHHHHHHHHHHHHHHHHHHLLLLL |
PRMN | - |
PiMo | - |