NONHSAT133457
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133457 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1685 nt |
Genomic location |
chr9-:99695966..99706337 |
Exon number |
2 |
Exons |
99695966..99696197,99704885..99706337 |
Genome context |
|
Sequence |
000001 catcacctga tgaatgaata agtttcagga tatccaccaa tggaatatta ttcagcaata aaaaggtttg atgtaatgat 000080
000081 agatgctaaa aacatggatg aaccttggaa atatttaaag taaaataaga caggtgtgaa agacatacat tgtatgattc 000160 000161 cattcatatg caagtccaga gcatgtaaag ctatatagaa agtcagttcg tggttatgta ggcctaggat gtagatcggt 000240 000241 ggggggcagg gagtgatagc taaaggacaa ggggtttttt ttcttcttca ttttttgaga tggagtctca ctctgtcacc 000320 000321 caggctggag tgcagcggca caatcttggc tcactgcaac ctccgcctct ccggttcaag cgattctcct gcttcagcct 000400 000401 ctcatgtagc tgggatcaca tgtgtgccac catgcccagc tgatttttgt atttttagta gaggcggggt ttcaccatgt 000480 000481 tggccaggct ggtctcgaac tcttcacctc aagtgattca ctcacctcgg cctcccaaag tgttgggatt acaggcgtga 000560 000561 gccactgcac ccagcctagg ggttttcttt ttgaggtgat aaaaatgttc taaagtttat agtgatgatg cttgcaattt 000640 000641 ctataagtag acttaatgca gtgatggttg caaattctat aaatatattt aatgtggtga tggttgcaaa ttctatgaaa 000720 000721 aacccaaatt gtacaatttc aatgagtgaa agcatgctat gtgaatgtct tcataaaggt tttatttaaa aaATGAGCAA 000800 000801 ACGGTAGAAT GTTAACATGG CCCACGTCTA TGTGGTGTCT ATATTGGTTT CTATTATATG TTTTCTATGT GGTTGAAACA 000880 000881 TTCCTAATAA AATGTGCATA GTTTTTTAAA AAAGAAAACA CATCAGTGGA CGTGAATGCA GGATGTCTTA TGAATGCTCA 000960 000961 CACAGAAGCT CCCATTCGTG AGGAATGCAG GGAAAAGCAG AAGATGGAGT AGGAGTTGGC ATGGCCCAGC TAGCTCAGAT 001040 001041 GACACACGAT GGTCCCAGTG GCATGACTTG GTTTGTGTGA TTTGTGCCTT GGGGTTTTAT TTTGGCACAT TATAAAGGAG 001120 001121 TAAATAAAGC CTGTATACAG TCAGTTTCTG TCTATTCTAA TGAAGGGCAA GGGGATGAAG GGATTTACCT TGAGTAACCA 001200 001201 TCCACTTACA TTTATTAGGA ATCTTGTGAT CCTATCGTCA CCCGTGAGAT TTCTGTGTTG TTTGTGTTTA ATGTCAGAGA 001280 001281 ATATCTTTTA ATCGCTCATA CAGTTTATGC AAATACCGTA TACGTGATAA ACGTCCCTAC AACATGATCT TTGGAATGAA 001360 001361 CTAAGACAAA GGAAACTCTG AGGAAGGACC ATGGCCTGAG AGGTGGAATT CATCCTTCCG AGGACTGAGA TGAGGACGGA 001440 001441 AAATGAACCA TCGgggggat tgacggtgaa gatgctaata cctgcccaGC ATCGACCCTA GTGCGGGTCC CAAGACCATC 001520 001521 CCCCTGTGCA GGCTCCACCA CCGCTGTGCT AACTGGACCG CGGCAGAAGA GTGGGTGTGT GCCAGGTTTC TGCTGGGCCC 001600 001601 TGCAGCTCCT CCCCCCAGCC CCATGTGATG TGCCCCTGGC CATTGACACT CAGTTCGAGG GAAGGCACTG GGGTGTACAC 001680 001681 TCAAA |
Predicted Small Protein
Name | NONHSAT133457_smProtein_953:1114 |
Length | 54 |
Molecular weight | 6169.9896 |
Aromaticity | 0.150943396226 |
Instability index | 80.9341509434 |
Isoelectric point | 9.83697509766 |
Runs | 11 |
Runs residual | 0.047284859641 |
Runs probability | 0.0446516034751 |
Amino acid sequence | MLTQKLPFVRNAGKSRRWSRSWHGPASSDDTRWSQWHDLVCVICALGFYFGTL |
Secondary structure | LLLLLLLEEELLLLLLEEELLLLLLLLLLLLLHHHHHLEEEEEELLLLEELLL |
PRMN | - |
PiMo | - |