NONHSAT133477
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133477 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1569 nt |
Genomic location |
chr9-:99906742..99911530 |
Exon number |
2 |
Exons |
99906742..99907022,99910243..99911530 |
Genome context |
|
Sequence |
000001 tccccctgaa aatggacttt tcttctttta ccacattacc aggctgTGac aaagatatct gagaatgtag aagcaggttc 000080
000081 agaagtgggt aaaagagaga gaggtcggga gagttgggaa cccttagaag acagcaagat gaggaaaagt ttagaccact 000160 000161 gaaaataact gttaaatact tgggatcaga agtctgacag aaagatggac agtgaaggcc agacttaaaa ggtctcagat 000240 000241 gaaaatgagg aatgtcctgt gaacaggagc caagggtaca tttgattggc cttagccctg gagatctctg aaactgtgaa 000320 000321 catgggggtg atgatttagg atgtatctgg tggaatgaac atctaggcag catagctcaa gaggtgtcct ctctacatcc 000400 000401 aacagcctgt gttcttatgt gtgacctaag aaatgacctc aagttgcaac ttctatttaa atgagaagtg gagctcaaaa 000480 000481 atttgaaaaa tttgcagcct agccaagtgg tcaaaaagaa aagctgattt tcagggggga aattcaagaa cgcttagagt 000560 000561 gtttgcataa aaaagagccc agtgcaaata gccaagacaa tggggaaaag gccttgaagg catttcagag atcttttcag 000640 000641 cagccgttgc tgtcacaggc cctagggatg aggagagaat ggtttcctgg gccagctcca tggcctggct gctgtgtgca 000720 000721 tcctcaggac accgctgcct gcatccctgc agctccagct ccagccatgg ctgaaagatg cacaggtaca gcttgggtca 000800 000801 ctgctccaag ccctgatggc ttccacatag tgttaagcca ggaggtgcac agagcaagag actagaggct taggagcctc 000880 000881 cgtctagact ccagaggatg tacagaaaag cctgggtgtc caggcagaag cctttccaag aggcagagcc tcatgggaaa 000960 000961 cctttactag ggcaggaaag aagggacatg tcaggttgaa gccctcacac aaggaggcac catccttcaa accccagatt 001040 001041 catagaccca ccaacagttt gcaccctcag tgtgggaaag atacagacac tcgacaccag cctcgtccat gagggcagct 001120 001121 gcggggactt atcactgcaa acccacaggt ggagatctgc ccaaagcctt gggagcccag ccctcacacc cctgtgccgt 001200 001201 ggatgtggga caaggattcc aaaaggatga ttttggagct gtaggattga atgacgggcc tgctgggttt tggacattca 001280 001281 tgtatcctag gctcaggggc agaagagact gcctcatctc agatgagact ttgggcttca gacatttgag taaatgctgg 001360 001361 aatgagttaa gaccttgtgg cactgtaggt aaggcatcat tgtattttac aaagtgagaa gtacatgaga ctgggggagg 001440 001441 cagggacaga ataagatttg gctgtgtgtc cctaaagaaa ctcatgtgga attgtaattg gaaatgttaa aactgggaca 001520 001521 ggtggaaggt gatttaatca tggagAGCAG TGGGTGTTGG AAGGTGGGG |
Predicted Small Protein
Name | NONHSAT133477_smProtein_1250:1348 |
Length | 33 |
Molecular weight | 3326.7336 |
Aromaticity | 0.0625 |
Instability index | 42.259375 |
Isoelectric point | 4.64935302734 |
Runs | 5 |
Runs residual | 0.0353954081633 |
Runs probability | 0.0428192898782 |
Amino acid sequence | MTGLLGFGHSCILGSGAEETASSQMRLWASDI |
Secondary structure | LEEEELLLLLLLLLLLHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |