NONHSAT133794
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133794 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1077 nt |
Genomic location |
chr9-:107090601..107091677 |
Exon number |
1 |
Exons |
107090601..107091677 |
Genome context |
|
Sequence |
000001 ATGAACCTCT TACTGTGTAA CCCCCACTGC AACTGACGGC ACTACCCCTG CTTCCACAGG GACCACGGAT GCGTATACAT 000080
000081 GGAATGGAAA CTGGATTCCG AATCTATAAT GCCGATCCAT TTAAAAAAAA AAAGAAGAAG AGAAAAAAAG AATTTCTAGA 000160 000161 AGAAGGAGTT GGCCATGTTG AAATATTATT TCACAGTAGC TATTTAGCTT GCTTTAGTGG CCAGTGGGGA AAAGCTGAAA 000240 000241 ATAGCCTCCC GGTAAAGCGA CAATCTGGGA TGACCAGAAA AGGACTGTTA TTGAAGTAAA AGTTTCTACA GAAGTTAAGG 000320 000321 CGGTCAAATT GTGACAAGAT AGAATTGTGG TCGTTTTGAG TTCCTTGATT AAAGTATTTA CAAGGATATG CAGTGCCCAT 000400 000401 CAGTCACACG TCTTGGAAAC CTGCTCTAAC CTTAAAGGCC TTTGTGCCTT GTGTCCCAGT AGATAGTAAC AGCTCTCTCG 000480 000481 TGACCTCCCC CATCACACAC ATGAGTTATG TGAAGCTTGT GGTCTTGCTA GCACCAAGAA GCCACCTGTA GACCTTCTTG 000560 000561 CACACAAGGA CGTCCTAAAC TGGTGGCCCT CAACCACCAG TAGGGAACAA GAATTGCAAC CACATCTCGA AAAAACAGAC 000640 000641 CCTTATAAGA ATATTTGCTA CTGCATCAGG GCCTTTTATC CAGGAACTAT GAAAAAGATC ACAAAGTGGC AAATATTTAT 000720 000721 TGCATCAACT TCAATTGGGA AGCTTCCCTC ATCGGAGTAT CCGACGACCA TGGCACAGTA Cttttttttt tttttttttt 000800 000801 tttttttttt tttttttttt tGCTGCTGAA AATCCAAAAA GTTCGGTGTT CAAACTAGAG CCAGTTTTCT TCCAAAATAC 000880 000881 TTCAGTTGCA AGTGGAATTT TTCCAACTCT CAGATTCCTT CAGGTTTGCC ATGCATTTGT GCTTTTGGAA CAGAGTCAAA 000960 000961 TGCTGTCATT GTGATTTGTG CAGATGGCAT CTACTACAGA TTCCTATTCA ACCCCAAGGG TGGCGCATCC AAGATGTCTA 001040 001041 AGTGCAGTTT CTAGCAATGA CCAGTGACAA GCTGTGA |
Predicted Small Protein
Name | NONHSAT133794_smProtein_68:298 |
Length | 77 |
Molecular weight | 8798.2583 |
Aromaticity | 0.105263157895 |
Instability index | 40.5039473684 |
Isoelectric point | 10.1255493164 |
Runs | 13 |
Runs residual | 0.0296430732002 |
Runs probability | 0.0227195521313 |
Amino acid sequence | MRIHGMETGFRIYNADPFKKKKKKRKKEFLEEGVGHVEILFHSSYLACFSGQWGKAENSL PVKRQSGMTRKGLLLK |
Secondary structure | LEEELLLLLEEEELLLHHHHHHHHHHHHHHHHLLLEEEEEELLLLEEEELLLLLLLLLLL LLLLLLLLEELLLLLL |
PRMN | - |
PiMo | - |