NONHSAT134611
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT134611 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
858 nt |
Genomic location |
chr9-:125824124..125825591 |
Exon number |
3 |
Exons |
125824124..125824247,125824541..125825049,125825367..125825591 |
Genome context |
|
Sequence |
000001 AGATGAATTT AGGAATTCTA TAAAACAACA ACAGAAGCTC TAAAAAATGC TAAGAATGAT AAACTGTGGT TTAAGACAAC 000080
000081 TACGAAGGTT AGGAAATTAA ATTGAGAATG GAGAGGAATA TGGAAACGTT CAAAATATTT TACACCAGTT ACATCAATCA 000160 000161 TATCACACTG ATTACGGAGA TGACAACCTG AAAAAGGATA CAGTTATTAG AGATATGAGA TTTGgAAATT CAACTGTACA 000240 000241 CAGGACGTAA AAAATAACAA AAAACTGAAA GTACTCTCTA TAACTGGGCC AGTTCTTGTC AATTTGCCAT CCCATATCCA 000320 000321 TTAATCATGG AATTATCAGA GAATGAAGGG GCAAAATGCC CTTAAAAGAA GGTCATTTTG AAAATTCACA CTCAATTTTT 000400 000401 GATGCCTTCA AGAATGATAA TAAATTGAGG AGTTCCATGT GAATCATTTG CTTAAAATAT TTGGCCTTAA GGAAATATGC 000480 000481 TGAAGAACTT GGAATAAATT CATTTGACTT GCTGGAGGCC ACATCATGCA AAAGTGATGC AGAAATTCTA ATAATGATGA 000560 000561 GTTTAGTAAG TTCCTATCAG AATGACATTA AATTTGAAAA GGTTCTGAAA ATAAAACACA GCAACATTAT GGATGATCCC 000640 000641 CTAAGAGAAA AAAAGCAAAG AGCTTTTCAA AATAGTCAAA GCAAGTGCTT ACAAAATTAA GCTTTATACA ACAATATATA 000720 000721 TTCCTTTTCT TTCTGAGTTA AACATAAATG TAACTGATGT AGAGAGCCTG CCAATGCAAC ACATGTAACA CTATTCGTGG 000800 000801 CCAAACTGAT CAAGTCAACC AAATACATCC TCTTAAGGAG GCTGTAGTTA GTATAATG |
Predicted Small Protein
Name | NONHSAT134611_smProtein_107:190 |
Length | 28 |
Molecular weight | 3328.8305 |
Aromaticity | 0.148148148148 |
Instability index | 41.33 |
Isoelectric point | 5.47808837891 |
Runs | 6 |
Runs residual | 0.0155662909286 |
Runs probability | 0.0269681446152 |
Amino acid sequence | MERNMETFKIFYTSYINHITLITEMTT |
Secondary structure | LLLLEEEEEEHHHHLLLLEEEEEELLL |
PRMN | - |
PiMo | - |