NONHSAT136292
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136292 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
850 nt |
Genomic location |
chrX+:13284167..13285017 |
Exon number |
1 |
Exons |
13284167..13285017 |
Genome context |
|
Sequence |
000001 GGCAGTTCAG GTTTTAATGG AGGGCAACAG TATTTCTTTG CAATGGTTAA CAATACTAGT AGAAACAGAA TATGAAATGA 000080
000081 AAAGTGGGGA AAGGCTTCAT GAGTATGAAT TTATTTGAAT GAAGAAAAAT TTCAATGTTA CTTAGGCTGA ATAAAGACAA 000160 000161 TGATCATTAA GTAATTCTAG AAAATAGAGA TTATTCTAGA TAAATGATCC TTATAAGATT CCTTTGATTC CTGTTAATTG 000240 000241 CAATCCAATA CATAAATATT GAAGGCTTAT TATGAGCAAA TTACTCTTTT TCGTATGACA AAGATGAAAA TACTTCTGCC 000320 000321 GGTTAACATT TTATAATTCT ATGACCTTAT GATTCTGAAC ACCTACGTAA GATATTTTTA AACCTTGACA GTTACATTGG 000400 000401 GAGATTTACA TCAAGAACCA GCACTATGGA GTCAGAATTT GCATGGAGTT CTATCTTCAA AGTTTTACTA CAAACCGGTG 000480 000481 CCACTGGGTC ATTTTTAGAT TCAGACCATT GGTTAGTGGC TTCTCCCCAC AGTGAACCGG ACAGTCATGT GCCACTTGGC 000560 000561 AGTTTTCAAG GTATGAGTTT ATTCTGTTTG ATGTTCTGTC AATTTCTCCA GGGGACAAGC AGCCAGATGG TTAATTGCCC 000640 000641 TTCCTTAAGC ACAGACGCAC TCACAGAAAA GGTGTGAGGA AGGACCCCTC CGAAAGAGGA GCCTCTCACA GAGCAGGCTG 000720 000721 AGCCGCTGTA CAGAGTTGAG ATTGTTGACC CACTGATTGT GCCTGAAAGG CTTTTCAGCC ACACAAAACC TGGGCTTCCT 000800 000801 CATTAGCATA TCAGAGGTGG CGCAGTGGTG GGAAATACTG CAGGCAACAA |
Predicted Small Protein
Name | NONHSAT136292_smProtein_425:676 |
Length | 84 |
Molecular weight | 9077.2003 |
Aromaticity | 0.10843373494 |
Instability index | 50.9289156627 |
Isoelectric point | 4.48541259766 |
Runs | 13 |
Runs residual | 0.0165997322624 |
Runs probability | 0.0285896756485 |
Amino acid sequence | MESEFAWSSIFKVLLQTGATGSFLDSDHWLVASPHSEPDSHVPLGSFQGMSLFCLMFCQF LQGTSSQMVNCPSLSTDALTEKV |
Secondary structure | LLLHHHHHHHHHHHHHLLLLEEEELLLLEEEELLLLLLLLLLLLLLHHHHHHHHHHHHHH HHLLLLLEEELLLLLLHHHHLLL |
PRMN | - |
PiMo | - |