NONHSAT136849
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136849 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(S) |
Length |
943 nt |
Genomic location |
chrX-:46544200..46545142 |
Exon number |
1 |
Exons |
46544200..46545142 |
Genome context |
|
Sequence |
000001 AGCATCACAG AGTTCCATCT AGAGTGGAGA GAGAGCCCCC CAGAGCCCTG AACAGCTCCA CTGCCACCAA TCTCATTACC 000080
000081 ATCACACCTG CAAAGGGGCC ACTGCTGCCA CAGCTGGCCC CAGTCACCAT TACTGTGACC GCAAACATGA GCAGTGAGGC 000160 000161 TGAGACACTT GGCATGACAC CATGGGCAGA GGCAGAGGGA GTGGCAGCCT GCAAACAGGA CAAGAAGGTT ATCCCAGTGA 000240 000241 AAGTTTGGGA ACAGTAAGAT GGTTCAGTGT AAGAAATATA TATGGTTTCG TCCACAGGAA TGACACTGGG TGAGATGTAT 000320 000321 TTGTATGCCA GATTGTCATA AAGAAGAATA ACCCCCAGGA AACACCCTGG CAGTACAGGG GATGGAGAAG CTGTGGAGTT 000400 000401 CGATGTTGAA GGAGAAAACG GTACACAGGC AGCAAAGATT GCAGGCCCTG GTGGAGTTCC AGTGCCAGGC AGTACAGATG 000480 000481 CAGTAGACTG AAGCCATTAT AGATGTTATC TGCATCATGG GGGTCTTCCA CACGGTCACC AGCACAATTA CCAGAACAAT 000560 000561 GAGAGTGGGG AAAAGAAGGA TTGGAGAGTT CCCTTAAACG TCAGGCCTTA CAGCACACAG AAGATGCCTC CTCCCTTGCA 000640 000641 GAGACCCTAT GATTCTTGAC CAGAGTGTTC TAACCCTCCT GTGCAGAGAC AAGTGATGGA GGGTGGTGAC AACCAGGGTG 000720 000721 AAGGAGAAGA GGTAGGTCAG TGAGACAGAT TACGTATTGG GGTTACAGAC CACGAATCTC CAGGGCCCCT CCTCACCTAG 000800 000801 AACAGTAATG AACACCCAAG GCCAGCAGCC ATGTCATTGT AGGCACCCCC CAACTTCAGT TACCAGCACA GACACCCAGA 000880 000881 AAACCCTGAA CCACAAGATG GCAAAGAGAC TGACAGCTAG GAAGTCCGTT GCCAAGGCTG AGC |
Predicted Small Protein
Name | NONHSAT136849_smProtein_146:256 |
Length | 37 |
Molecular weight | 3948.4991 |
Aromaticity | 0.0555555555556 |
Instability index | 53.0 |
Isoelectric point | 4.71392822266 |
Runs | 7 |
Runs residual | 0.013986013986 |
Runs probability | 0.0394680394681 |
Amino acid sequence | MSSEAETLGMTPWAEAEGVAACKQDKKVIPVKVWEQ |
Secondary structure | LLLHHHLLLLLLHHHHHHHHHHHHLLLLLEEEEEEL |
PRMN | - |
PiMo | - |