NONHSAT136977
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT136977 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
817 nt |
Genomic location |
chrX+:48797263..48798079 |
Exon number |
1 |
Exons |
48797263..48798079 |
Genome context |
|
Sequence |
000001 AGCTGCAGAG GGAGACAGGG ACCTGGTCTG CTCCCCACTA CCCTCCTGGT CCAGTGGGAA CCCTGGCCCC ACTGAGAACC 000080
000081 AATCTCCTGA GGAGATGAGC CAGGACAAAG GTCTCACTTG CCTGTCAAGC AGCTGTGGTG TGACCTGGTC TGTAGCCCCA 000160 000161 ACTACCCCAA CTAGCATACC CTCAGTGGGA GAGACAGAAC TCATCCCACT GGATAGTCTG GTTCCTGAGA TGTGTGCTCC 000240 000241 TCTGCTCAAG GATTCCCACT GCAAGGATGA GAAACCTGAA GGATACACGG GAGAGGCTGA AGGAAGCTGG TGTACAGGAA 000320 000321 ATGGCCCGTG GGAATCTTCT TTCTGTGGCC TGGTTCAACC tcaaatacca atgttctgac actggttgta tgacctagat 000400 000401 agggtagggt cttggctttc tcttgaggcc tcagtttccc catttataaa acaatcaaaa ttgatctcag atccatccct 000480 000481 cctagtgctg atgttccaag aCCAAAAGGC CCAGAAGAGT GGGCCTAGCT AATGTTTCTG GGCCTCATCG TGGTAACATG 000560 000561 CACAGCCCTT GCCACTCCCC CATGGCCCAT GTAGAAACAA CCATGTGGCC TTCACTCTGC CCACAGAAGC TAGCACCAGG 000640 000641 ACCCTGGTCA GGGTTAGAGG TTTCTGCTGA GTCAAAGCCA CATGGAGGGA GGGAGCAAGG GAGAGATGCA GAGTCATGTT 000720 000721 TCCAGGAGGA GGTTATCTGA GCATAACAGG GACAGGGTGG GCCACAGGAT ACCTCTGAGG CTCAGGTTCC CACCTCCACT 000800 000801 CCACCCAAGC CTTCAAT |
Predicted Small Protein
Name | NONHSAT136977_smProtein_557:739 |
Length | 61 |
Molecular weight | 6572.3186 |
Aromaticity | 0.05 |
Instability index | 71.3116666667 |
Isoelectric point | 5.36993408203 |
Runs | 8 |
Runs residual | 0.0164007092199 |
Runs probability | 0.0482026143791 |
Amino acid sequence | MHSPCHSPMAHVETTMWPSLCPQKLAPGPWSGLEVSAESKPHGGREQGRDAESCFQEEVI |
Secondary structure | LLLLLLLLLLLEELLLLLLLLLLLLLLLLLLLEEEEEEELLLLLLLLLLLLHHHHEEEEL |
PRMN | - |
PiMo | - |