NONHSAT137602
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137602 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1477 nt |
Genomic location |
chrX+:73416216..73417692 |
Exon number |
1 |
Exons |
73416216..73417692 |
Genome context |
|
Sequence |
000001 tctatattaa ggtatacaac acaatgttaa atgaaacata tatatatata tagtaaaact atagtggaac aatgaacata 000080
000081 cccatcatct cacatagtta ctgattattc ccccattggc aagagcaggt ataatctact catttagcaa aaagtcctga 000160 000161 acacaatata caatatgtat taactatagt cctcatgttg tacatttgat ctttgatctt ttcacttgtt catcctgcat 000240 000241 atttactact ttgcatcctt tgacctacat ctcatttcct ccaccttatc ctgaccttag taattactgt tttattctct 000320 000321 atctctatat atttaacctt ttttttcttg attccacata taagtgagat cacgcaatat ttttctttct gtgtctggct 000400 000401 tatttcattt agcataatgt cttctaggtc tatccatgtt ttggcaaatg acaggactgc cttcttttta aaggctaaat 000480 000481 aatattctaa ttatctatct attgatctct ctatatcaca gtttctttat ccatttgccc attgatgaac acctaggttg 000560 000561 tgtctgtatc ttgactattg tgaattgtgc tgcaataaac ttgggagtgc agagataatc tcattccctt tggggatata 000640 000641 cccagaagag ggattgctgg gtcatatggt agttctattt ttaatttact taggaacctc catactgtct tccataatgg 000720 000721 ctgcaccaat atataataca ttcccactaa cagtgtacaa gtgctccctc ttctccacac cctcaccaac acttgttagc 000800 000801 tcttgtcttt ttgataatag ctatcctaac atgtatgagg tggtatctca aagtagtttt gatttgcatt ttcctgatga 000880 000881 ctggtgatat tgagcaccat ttcatatacc tgttggtcat tttctgtcat ctttgaagaa atgtctattc aagtcctttc 000960 000961 cccacttttt tttaatcagg ttatatgttg tcttgctatt gagttgtatg agttcttcct aaatcctgaa tattaaaacc 001040 001041 ttgcctgata tatggtttgc aaatattttc tccttatctg tacattgcct tttcattttg ttgattgttt tcgttctgtg 001120 001121 tagaagtttt ttagattgat ataatttcat ttatttattg ttgcttttgt agcctgaggt tttggtgtga tatccaagga 001200 001201 aacattgcca aagccagtgt caaggagctt ttcccttatg ttttcttcta gatttatggc ttcaggtctt acattcagat 001280 001281 cttttatcca ttttggattg atttttgtgt atggtgtaat gtaagagtct aatttcattc ttttgcatgt ggaaattcca 001360 001361 gcacctattt attgaagaga ctaccctttt ctcattttgt ctttttggtg ctcttgtcaa aaattcatta accatacatg 001440 001441 tttggattta tttctggcta tttcactgtc ctgtgta |
Predicted Small Protein
Name | NONHSAT137602_smProtein_665:886 |
Length | 74 |
Molecular weight | 8226.4002 |
Aromaticity | 0.164383561644 |
Instability index | 57.601369863 |
Isoelectric point | 4.03216552734 |
Runs | 15 |
Runs residual | 0.0613345117101 |
Runs probability | 0.06245068598 |
Amino acid sequence | MVVLFLIYLGTSILSSIMAAPIYNTFPLTVYKCSLFSTPSPTLVSSCLFDNSYPNMYEVV SQSSFDLHFPDDW |
Secondary structure | LEEEEEEELLHHHHHHHHLLLEELLLLEEEEEEEEELLLLLLEEEEEEELLLLLLEEEEE ELLLEELLLLLLL |
PRMN | LLLLHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLL |
PiMo | ooooTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiiiiiiiiii |