NONHSAT137856
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137856 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1110 nt |
Genomic location |
chrX-:95325668..95326777 |
Exon number |
1 |
Exons |
95325668..95326777 |
Genome context |
|
Sequence |
000001 AAAAGAAAAC GACAGGCCAA GATGATGAAA GCTGGGGGCA CATTTTAAAA TAGCAAAAAT ATTTACAGAA AATAGCTGAT 000080
000081 GCCTATTTAA TGCTAATGAC TGGCAAGGTA TAACTTGCAG TAATGTGAAT TGGACCAGAA GATCAGAGTG TAACATGTAA 000160 000161 TACTCCAAAG TATGATAAAT TAGAAGAAAG AACAGATATG TTGGTGGCTT TAATAAAAGA TAATGTTggc tgggtgcggt 000240 000241 ggctcacgcc tgtaacccca gcactttggg aggccgaggc aggcagatca cgaggtcaag aggtcgagac catcctggcc 000320 000321 aacatgttga aaccccgtct ctactaaaaa tacaaaaatt aatcgagcgt ggtggcgtac acctgtagtc ccagctactc 000400 000401 aggaggctga ggcaggagaa tcgcttgaac ccaggaaacg aaggttgcag tgagccaaga ttgcgccact gcactccagc 000480 000481 ctgggtgacg agagcaaaac tctgtctcaa aaaaaaaaaa aaaaaaaGAT AATGTTGAAT ATATAGAATG AGAAGAATCC 000560 000561 GAAGGTAAAT ATGATGAGTT TGGATATAAA AAGAAAAAAT GCAGAGGGAA GCCTGTTGGT CCTGCATCTA TATGAAAGGA 000640 000641 GGTTGAAGTA AAGAATCAGA GGGAGAAGAA GAGGATGAGG ATGAAGATCT TTCTAAATAT AAATTAGATG AAGATGAGGA 000720 000721 TGAAGATGAT GCTGATCTCT CAAAATATAA TATTGACGTC AGTGAAGAAG GCGATAGTAA TAAAAAGAAA TCTAATAGAA 000800 000801 AAAGTCACTC AATATCTCAA TCTTCACATT CACTATCTTC ATCATGTTCA TTCTCCCTTT CAAATTCAAG GTCTAGGTCC 000880 000881 AGGTTCCCTT CAAGAAGTTC TAGTTCACAG TCAAGATCTT GTTTCAGTTC CAGAGAACAT TTAAGATCCT CTGGGTTGAA 000960 000961 ATCAAGATCC AGTTCCAGGT CCCACAGGGG CTCACTAAAC AACCCTGAGC CCAGGGCCAA CCCTTACAGA ACACATTACT 001040 001041 TTACCCAAGC ACCACAGGTC ATCTTCTGGA TCATTCCATT CTGGTTCCCA TTCAAGTTCA AAAAAGAAAT |
Predicted Small Protein
Name | NONHSAT137856_smProtein_707:943 |
Length | 79 |
Molecular weight | 8980.6629 |
Aromaticity | 0.0384615384615 |
Instability index | 75.0743589744 |
Isoelectric point | 9.77606201172 |
Runs | 9 |
Runs residual | 0.0182926829268 |
Runs probability | 0.0409919723646 |
Amino acid sequence | MKMRMKMMLISQNIILTSVKKAIVIKRNLIEKVTQYLNLHIHYLHHVHSPFQIQGLGPGS LQEVLVHSQDLVSVPENI |
Secondary structure | LLLHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLEELLLLLL LLEEEEELLLLEELLLLL |
PRMN | - |
PiMo | - |