NONHSAT137936
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT137936 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
772 nt |
Genomic location |
chrX+:100766009..100788437 |
Exon number |
3 |
Exons |
100766009..100766042,100786631..100787001,100788071..100788437 |
Genome context |
|
Sequence |
000001 TAGGTTGCTA TGAAAAGAAA AATCATGATA TTAAATTTTA GCATCGATAT TATGGAAGCT ATGCCTGGAC TCAACAACAC 000080
000081 GAACTTCTAC TCACCAAGGC TGATCTTGTA CTAATACTAA GTGCCCAACC TGACAACAGA GAAGATGATG AGCCTTTATA 000160 000161 AGACACCATT CCTTAGGGGC ATCAGCCAGT CCCATGGTGT TAGGATTATT ACATGGGACA CCTTTCATCA TCATGAAAAC 000240 000241 AGAAACTTTT CCTCATGGAA ATGAATATGT ATTTTAGACA CACATTTACC TTCTTTGCTG ACAATGATTC TGTCATCACC 000320 000321 ATCTCCATGG ACTTCCAGAA TGCCTTAATC ATCATCAGAG TATCCTACAC AAAGTTGTCT CTGACCAAGG AACTCATTTA 000400 000401 ATGGTGGACT GCATCCCCCA GACTCCATTT GTAATTGACT TCTGCTTGGG TTTGGTCAAT GGAATGCCCT GGCACAGCTT 000480 000481 TGGAGGGAAG AAGAGAGAAG ACAATGTATT TCTTCACTGC TCCCACTCTG ATTTGGGCTA TGTTTTATTG GCAGGGACTG 000560 000561 CATCCCTTCA AGATTTTAGC TTCTTCCAGA AGTCCCCTCC TCCATGACTC TAGCTCTCAC TAGGCTCCAG AAATACTATT 000640 000641 TCTTCCTCTT GCCCTCTTAG GCCTAGGGTA ACAGCTACCT GCTATTGCTA ACCTCTGGGT GCCACAAAAT TGCTTGTTGG 000720 000721 GTCTCATAAT CTTGCATATA CCTCTGTAAG TAGTCCCTAC ATTAAAGTCC CT |
Predicted Small Protein
Name | NONHSAT137936_smProtein_458:622 |
Length | 55 |
Molecular weight | 6245.1523 |
Aromaticity | 0.148148148148 |
Instability index | 76.1909259259 |
Isoelectric point | 7.98040771484 |
Runs | 7 |
Runs residual | 0.0330623306233 |
Runs probability | 0.0898882075354 |
Amino acid sequence | MECPGTALEGRREKTMYFFTAPTLIWAMFYWQGLHPFKILASSRSPLLHDSSSH |
Secondary structure | LLLLLLLLLLLLEEEEEEELLHHHHHHHHHHHLLLLLEEEEELLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToooooooooooooooo |