NONHSAT138382
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138382 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1024 nt |
Genomic location |
chrX-:119705031..119709379 |
Exon number |
3 |
Exons |
119705031..119705855,119708406..119708485,119709261..119709379 |
Genome context |
|
Sequence |
000001 CCTAGCCCGC CGAAAGGGCG GGCATTGCTA AAGTGTTTTC AAAAGGTCTT CCCAATCCTC TGCTTTAGAC AGCTCGGACC 000080
000081 TTAGATAGAA GAACACAACG GATCCTCCAG TGACTGACGA CCCAAAGGAC GGATGATGTC ACAGTCATCT GGATCAGGAG 000160 000161 ATGGGAATGA TGATGAGGCT ACTACCTCTA AAGACGGTGg cctactgaac atcagtcaca cagcatggta atatggttgt 000240 000241 tccaacgtat ctgcagggaa ctggctccag gaaccctgca gataccaaaa tcggtgcata ttcaactccc acagtcagct 000320 000321 ctgcggaacc cacagataca aaaagttggc cttcccttta caggtttcca atcctgcaaa tcctgtattt tccattcctg 000400 000401 cttgattgct gatgtggaac ccgcccatgc agagggccga ctgtatttat tgaaaaaata tgtgtataaa tggaccatca 000480 000481 cagtttaaac cccaattgtt caagggtcac ctgtaaacag ttgcctaaat gggccatgat ctttctcatg cctccatgtc 000560 000561 tttgcacaca ctgttcccCT TTTCAAGTAA TCCATAGATC TCTAGATCTC ACTGTCCTGA TACTACAAAT TAAGTTTGGA 000640 000641 TTTGTATGAT TAATATACAG GTTACAACGT TAAGCCCCCA TATTGTGGAC CATAGAGAGT CCATTCTTCC ACCAGGTTGG 000720 000721 AGGGTGCATC CCCCGCCCTT GAGTAATTTC CAGAAATCCA CAAGGTATGC TTAAATGTTA CAAAAATCAA TCCTAGTTGT 000800 000801 CATTTGTTAT CTCTGCCAGC TATTCTTTCT GCATACTGTC ATGGTCTGCC TTCAATAAGT CACCACTTCC TGTCTTGAAA 000880 000881 Ctttttttaa aaaaaccttt tagttttttt aattttaaaa atttCTGCAA ACACTATGGC GACttgtgta attttaatac 000960 000961 atacaaaaga tgtatgatgt gtaatttatg gagcataatt attaaataaa catccaggaa tcta |
Predicted Small Protein
Name | NONHSAT138382_smProtein_224:487 |
Length | 88 |
Molecular weight | 9968.7592 |
Aromaticity | 0.103448275862 |
Instability index | 54.9126436782 |
Isoelectric point | 9.46148681641 |
Runs | 16 |
Runs residual | 0.0456486042693 |
Runs probability | 0.0365825384208 |
Amino acid sequence | MVIWLFQRICRELAPGTLQIPKSVHIQLPQSALRNPQIQKVGLPFTGFQSCKSCIFHSCL IADVEPAHAEGRLYLLKKYVYKWTITV |
Secondary structure | LLHHHHHHHHHHHLLLLLLLLLLEEEELLHHHLLLLLEEEELLLLLLLLLLLLLEELLEE EELLLLLLHHHHHHHHHHHHEEEEEEL |
PRMN | - |
PiMo | - |