NONHSAT138452
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138452 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1459 nt |
Genomic location |
chrX-:123306851..123308309 |
Exon number |
1 |
Exons |
123306851..123308309 |
Genome context |
|
Sequence |
000001 ATGACTACAG AAGAACATAT AAATCTCACA AAGGGCTGTA TGACCTTTGA GGACATCGCC ATTTACTTCT CACAGGACGA 000080
000081 GTAGGGACTG CCTGATGAGG CTTGGAGGCT CCTATACCTT GAAGTGATGC TGGAGAACTT TGCACTTGTA TTTTACCCAG 000160 000161 GATTTTGTAC AGAAATACTG GGCGTGGTGG AGCCTGCAGC AAACTAGTTG GAATGTGCCT CTTGTAAAAG TAGCCTCACT 000240 000241 GGGTTGTGGG CATGGTAAAG AGGATGAAGA GACACCTTCT GAGCAGAATG TTTCTGTGGG AGTGTCACAG TTTAAGGCAG 000320 000321 GTTCATCCAC ACTGAAGACT CAACCCCGGG AGATATATGT TCCATTCCTG AAAGATATCT TGCCTCTGGC TAATCTCCCT 000400 000401 GGGCGGGAAC CTTACTTGGT TGGAGCACGT GCAAACCAGT ACCAGCACCA GAAACATCAC AGTGCAAAGA AATCCTTGAA 000480 000481 GAGGGACATG GACAGAGCCT CGTAAGTGAA GCACTGCCTT TTCCATATGT CAGGGAAGCC CTTCCGCAAA TGCGAGGTTG 000560 000561 GGAAGGACCT CCCAGCCATC TTGGGGCTTC TAGGTCCCTG GTCTTTCCTA AAACTGAGAA GCCCAACACG ATCACCAAAT 000640 000641 GTGGAGAGGA CACTCACAGT CAAAAAAGTC ATTACAAGTC AGGTCAGTGT GGGAAGGCTT CCAGGCACAA GCACTCCTGT 000720 000721 TCACTGTCTA AGAGTTTACA CTGGACAAAG CCTTTATGAG TGTATCAAAT GTGGGAAAGC Tggctgggcg cagtggctta 000800 000801 cacctgtaat cccaacactt ttcaaggccg aggtgggcgg atcacctgag gtcaggagtt tgagaccagc ctggccaata 000880 000881 tggtgaaacc ctctctacta aaaatacaaa aaaaaaaaaa attagccagg tgtggtggtg tgcacctgta gtcccagcta 000960 000961 cttgggaggc tgaggtagga gaattgcttg aacccaggag gcaaaggttg cagtgagctg acatcacatc actgcactct 001040 001041 agcctggaca acagagtgaa agtctgtctc aaaaacaaaa aacaaaacaa aacaaaaaaT GGCAAATGTG GGGAAGCCTT 001120 001121 CTGTGGCAAG TACTCACTTG TTTAGCACCA GAGAGTTCAC ACTGGAGAAA GGCCTCCATC CTTATTCAAC ATGGGAGAAT 001200 001201 TCATATTGGA GCAAGGCCTT ATGAGTGTGG CCAGCATGGA AAGTTCTTTA GTCAAAAGTC TGGCCTTATT CAACACCAGG 001280 001281 TGGTTCTCAC TGGAGAAAGG CCTTATGAGT GCAACCAATG TGGGAATTCC TTTAGCCAGT GCGCCAGCCT CATTCATCAC 001360 001361 CAAAAATGTC ATAACACGTG GAGGCCTCAT GAATGCAGCA AATGTGGAAG AGTGTTTACC TTCAAGATCT ATCATCTTTT 001440 001441 AGCTCCTGAA AGTCCACAC |
Predicted Small Protein
Name | NONHSAT138452_smProtein_1190:1441 |
Length | 84 |
Molecular weight | 8896.3364 |
Aromaticity | 0.0722891566265 |
Instability index | 58.0481927711 |
Isoelectric point | 6.13909912109 |
Runs | 15 |
Runs residual | 0.0406961178046 |
Runs probability | 0.0412589059648 |
Amino acid sequence | MGEFILEQGLMSVASMESSLVKSLALFNTRWFSLEKGLMSATNVGIPLASAPASFITKNV ITRGGLMNAANVEECLPSRSIIF |
Secondary structure | LLHHHHHHHLHHHHHHHHHHHHHHHHHHLLHHHHHHLLEEELLLLLLLLLLLHHHHHHLL LLLLLLLLLLLHHHHLLLLLEEL |
PRMN | - |
PiMo | - |