NONHSAT138736
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT138736 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
2041 nt |
Genomic location |
chrX-:135951351..135956141 |
Exon number |
3 |
Exons |
135951351..135952576,135954427..135954504,135955405..135956141 |
Genome context |
|
Sequence |
000001 AAAAAGTAAA ACATGTTTAA TTTTATTTGA CTTTCGCATT GCTTTTCAAC AAGCAAATGT TAAATGTGTT AAGACTTGTA 000080
000081 CTAGTGTTGT AACTTTCCAA GTAAAAGTAT CCCCTAAAGG CCACTTCCTA TCTGATTTTT CCCAGCAAAT GAGGCAGGCA 000160 000161 ATTCTAAGAT CTTCCACAAA ACATCTAGCC ATCTAAAATG GAGAGATGAA TCATTCTACC TATACAAACA AGCTAGCTAT 000240 000241 TAGAGGGTGG TTGGGGTATG CTACTCATAA GATTTCAGGG TGTCTTCCAA CTGAAATCTC AATGTTCTCA GTACGAAAAA 000320 000321 CCTGAAATCA CATGCCTATG TAAGGAAAGT GCTATTCACC CAGTAAACCC AAAAAAGCAA ATGGATAATG CTGGCCATTT 000400 000401 TGCCTTTCTG ACATTTCCTT GGGAATCTGC AAGAACCTCC CCTTTCCCTT CCCCCAATAA GACCATTTAA GTGTGTGTTA 000480 000481 AACAACTACA GAATACTAAA TAAAAAGTTT GGCCAAAACC AACCATGAAG CTGCAAAGGT GCTTGCTCTT ACTGTTTCAA 000560 000561 ATTTTTGCAA CTCTGTAGTG TCTCACTTTT AAAGGAACAG CTTGATTGCA AAGGAGAAAA TAGATAAGCA ATGAAGTTAT 000640 000641 CTCCAACTTC CTAAAGGCTT ATGACTTCTA AAAAGTGAAT CTATCAGCAT TCCACATCAG ATTTAAAGCA TCAAATGCCT 000720 000721 GTGAAACAGC AAAGATGGTT GGTGATTTTG CTCATTATGG TCGTGGAGTG CTGATTGATT CACAGTAGAT AAAGCTGGCA 000800 000801 GTAAGAAATG CTAAGAGTTG TTGAAGCAGA AGGCGGCTGA TTGTCAATAA GTCACTACAG TTGCATAAGC AGTGCTGTCA 000880 000881 GAATTGGTTT GGTGCAGGCA ATAGATTTTG CCTTCAGGGG TTCCTGTGGA TCTGAGGAAG GCATCAGTGT TGATTAACAC 000960 000961 TCATAACTAG GGAGTGACTG GTAGTTACTT AAAGCAAGTA ATTGACCAAA TGGAAAAGGG GAAGTAATTA AGGAAATTGG 001040 001041 TAAGTGGAGG TAGTCAGGAA GTTCTTGTGG TTCTTCACAT AGATTTTACA GCTTTGGCTT TCATTTTGTT TAGCTAAAGT 001120 001121 CATGGGGACA ACTCTTCAAT TTAGAACTTA AGTTGAATTA TAAAAATGAT GGATATAAGT GGTAGCTGTA TCTAGTGAAG 001200 001201 TGTCTGTCAG TAAGTGAAAC ATTTTTTGGT GGTGGCTTAT CCACAAACAG TTTAGTTGTA GAATAAAACT TATGAGTGAC 001280 001281 ATCTGGAAAG TAACCATGCT AAGATGGCAA GCACACTGGA AACAATTAGG CCACTTGGCT TTCTTTTGCT GTATTGTTTT 001360 001361 ATAAGCCTAC TTTACCTCCC AGTCTTGGAA ACAAGTTTTA GTTTTTTATT GGTTTGGAGA CTAGAGCCAA TAGTATAATG 001440 001441 TTCTCAAAGG AAACAGACTT GAGTTGTTGG ATTAGAGGAA CTAACCCAAC TTATATGATT TTTTTTTTGT TTTTGTCGTG 001520 001521 TAGTTATGGC ACTGTCTTAT TTGGAACATT TGCAACTAGG GATAATACAA CATTTTTAAC TCTCATTTGA CAACCTACTA 001600 001601 CTAATCACAG ACCACAAGGG TAATGACCAA ATTTATGTGG TTTTTGCACT CCATAGTTGT CTTAGCCCAA TCTTTCTATA 001680 001681 CTCTTACGAT TACTTGGGTT AACGCTTCTG TGAGGACCTT CTGGCTCTTG AGATACCCTA AATATTTAAG ATATTTAGAT 001760 001761 ATCTTGAAGA TAGTATAGGA TATAGAGATT GTACCAAATA GGAATATAAG GAGTATGTTA AAATGACCAG ATACCTGTTT 001840 001841 GATAGTTTAC TGACCTAGCA GATGTGTGGA AAAGGAATCA GATCTTGATT CTTCTGGGTT TATACTGGTT GTAAAACAGA 001920 001921 ATGATACAGA AAATGTTTTC CTTGTTTAAC TGGTAGTTGA ACATAGAACT TGGGTATTAT AGATCACTTT TCACTTTTTG 002000 002001 GAATGTTTTG TATTGAAACT TAATAAAACT TTAACATGGC A |
Predicted Small Protein
Name | NONHSAT138736_smProtein_257:469 |
Length | 71 |
Molecular weight | 8014.2233 |
Aromaticity | 0.114285714286 |
Instability index | 57.2085714286 |
Isoelectric point | 8.95843505859 |
Runs | 9 |
Runs residual | 0.0162659123055 |
Runs probability | 0.0424149639836 |
Amino acid sequence | MLLIRFQGVFQLKSQCSQYEKPEITCLCKESAIHPVNPKKQMDNAGHFAFLTFPWESART SPFPSPNKTI |
Secondary structure | LEEEEEEEEEEEELLLLLLLLLLEEEELLLLLLLLLLHHHHLLLLLLEEEEELLLLLLLL LLLLLLLLLL |
PRMN | - |
PiMo | - |