NONHSAT138908

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Basic Information

Transcript ID

NONHSAT138908

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2380 nt

Genomic location

chrX-:146990949..147003676

Exon number

3

Exons

146990949..146992513,146993160..146993746,147003449..147003676

Genome context

Sequence
000001 CAGTCATTCC ATTAGTTTAA TACTGAGTTG TTCAGAAACT TCTCAGTCAG TAACATGAAG ATCCATTCCT GAAAAGCACT 000080
000081 CAAACTGGAC TTGAATTTTT AAAAAATGAA GAATAGAATT AGCATAAAAT ATTAAAGAAC CTCATCATTA AAATTATATA 000160
000161 ACGAGACACT TACTTGTTTT CAAATGCAAC TGTTATTGAA TCTTCATGAA CATCCTTTAC AAATGCCTTG TAGAAAGCGC 000240
000241 CATTGGAGCC CCGCACTTCC ACCACCAGCT CCTCCATCTT CTCTTCAGCC CTGCTAGCGC CGGGAGCCCG CCCCCGAGAG 000320
000321 GTGGGCTGCG GGCGCTCGAG GCCCAgccgc cgccgccgcc gccgccgccg ccgcctccgc cgccgccgcc gccgccgccg 000400
000401 ccgccgcgct gccgcacgcc ccctggcagc ggcgcctccg tcaccgccgc cgcccgcgct cgccgtcggc ccgccgccCG 000480
000481 CTCAGAGGCG GCCCTCCACC GGAAGTGAAA CCGAAACGGA GCTGAGCGCC TGACTGAGGC CGAACCCCCG GCCCGCTGCG 000560
000561 GGTGTAAACA CTGAAACCAC GTCACGTGAT CAACGCTGTT CCCTCCCCCC GCGGGCTCAG CCCCTCGGCC CCGCCCTCTC 000640
000641 TCTTCAAGTG GCCTGGGAGC GCGCGCATGC GCGCTGCTGG GAACCGGCCG GGGTGCCGGG TCGAAAGACA GACGCGCGGG 000720
000721 CCGGGCGTGC GCGGGCTTGG TGGAGGGCGG GAAGGCTGAA GGGCGGTGAC AGGTCGCACT GCCTCGCGAG GGCCAGAACG 000800
000801 CCCATTTCTG CAGAGCTGCC TTAATCCATG TTCCCTTCGG GATGCTGGTa tccaactgag aagttgacgg agcatctatc 000880
000881 gtgtgccaga cactgtgcta agtgctaacg agaaatcggt gagcaaaaca gaaaagaaaa aaaaagaaga aacgactgcc 000960
000961 agcattgaac ttagtaccta gcaaagtagg tggacataaa tcaaattgtc agacaagtaa atgagtagtt gcagctgtga 001040
001041 taaggggtat gaagaaTAGG CGCTTCCATG ATGGCGGAAC ATGACCTAGT CTGGGGTGGA GAAGGGGAGA TGATTCCAGC 001120
001121 TGGAATATGG CAGGTGAGAG TTAACTAATA GCACTGAGTT GGCAGAGGCA GGATGACCTG CCCCAGGCAG GTGCCCCAGA 001200
001201 ATGAGAGGAT GTTGCTGCTG GTGGAACTCC AGCTTTAAAG CGGTGGATCT AGGGCCACAT TCCTCAAGGC CATAGCAAAC 001280
001281 AGGAAAGACC TTTTGGACTA GGGTCTTTGG AGTAGTCACA TGAGGCCAAG AACCCAATAG GGCTGAAAGA GAATCTCATC 001360
001361 ATAGGCTGAA TGGGAGCAGA GCATTAGCTG CAACTCCAAT GTATTATAGT AAAAGGGGAC ACATTGATTA GAATGATTAT 001440
001441 ACCCCTCCAA GTGTAAGCTG TTGTTCAATT TACCCAGGGC TTAAAAATAT GTCAACTCTT CACAACCATT TTTACTACAA 001520
001521 GCCACACTCA ACCTGTGTTG TTCCCTGAAC CTGTGATGCA CTTTCATCCG TTCATGTCTC TACACATCCT TCCTGGGCCC 001600
001601 CATAGAGGCC CTGCACCTTA AGGTTTTCAG CTGGATTCCT ATTAGCTAGT TATTTTatct caggtacaga gagttaactt 001680
001681 tgctcctcaa ttttcagcac attgtcatat cagtccctac agggtccttg tttacattat tttatagtgt ttatattatt 001760
001761 ttttcctcat ctttctcgat ccccactctc attcttctag acacaagctg caatatgttc gatagagatc cttgataatt 001840
001841 taacacagat aatgttttgt ttatgcctct tgcatttaca gagatggtat tggactgtaa atctctattt cccactgttt 001920
001921 tactcaacag tctgtttttg agctataccc acattgctgt gtgtacacct agtttgctac CGAGTATGCC AGAAATTTTA 002000
002001 TTCATACATA TCCCTACTGA TCGGGCATCT AGGTTACTGC CAACTCCCTG AAGTCATACT GTGGTGAAAA CCCTTGTGAA 002080
002081 TGTCTTTACA AACCTTTGCC AGAACTTATT TTGTGCTCTT GTAGAACTTT GTGCATACCC TCTGCTTCct cattacactg 002160
002161 cttggcatat agcagagact caacaaatgt tgaatacctc tactatGATG GTTAGtgtac tagaataatt tatttatatt 002240
002241 tctgttttcc ttattggatt attagtacct tccagacagg gcaaatgtct tttctatctt tgtgtccctg gcacattaaa 002320
002321 agtggttgat ttcaaggtat gttcaatgaa tgaataaatA CTTATCTTCA CTGCCAGTAC
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Predicted Small Protein

Name NONHSAT138908_smProtein_1862:2050
Length 63
Molecular weight 6914.2423
Aromaticity 0.0806451612903
Instability index 73.1467741935
Isoelectric point 5.97674560547
Runs 11
Runs residual 0.0237788018433
Runs probability 0.0867177337767
Amino acid sequence MPLAFTEMVLDCKSLFPTVLLNSLFLSYTHIAVCTPSLLPSMPEILFIHIPTDRASRLLP
TP
Secondary structure LLLHHHHHHHLLLLLLLHHHHHHHHLLLLEEEEELLLLLLLLLLEEEEELLLLLHHHLLL
LL
PRMN LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLL
LL
PiMo oooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiii
ii