NONHSAT139256
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT139256 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1641 nt |
Genomic location |
chrX+:155253032..155255331 |
Exon number |
2 |
Exons |
155253032..155253125,155253785..155255331 |
Genome context |
|
Sequence |
000001 CTGGCCAGTG CACCCCCACT CCCACCCTCA ACCGCGGCCC CTGTAGGCCA AGGCGCCAGG CAGGACGACG GCAGCAGCAG 000080
000081 CGCGTCTCCT TCAGTCCAGG GAGCTCCCAG GGAAGTGGTC GACCCCTCCG GTGGCTGGGC CACTCTGCTA GAGTCCATCC 000160 000161 GCCAAGCTGG GGGCATCGGC AAGGCCAAGC TGCGCAGCAT gaaggagcga aagctggaga agaagaagca gaaggagcag 000240 000241 gagcaaggtg aGCGGGCCCT GGAGCCTGCG GTCGGAGGGC CTTGGGCAAG ATCGCCTCCT CCCCTCCAGC CCTGAGTCCA 000320 000321 CTGGGTGCTT TCTGCCCACC CCCTGCTCTT GCCAGCTGGC CCCTGCTTCC CCTAGGGCAC ATGCTGGAAG CCCTGGGCCG 000400 000401 CCACCAGAAG TCCTCAGCCC TCCTGCCTGG GCTATGGCTC CTTCCTGGTT TGGGAGCCAT AGTGAAGCTT TCCTCTCTAA 000480 000481 GCTCACCCAG CCCAAACTGT GACAGGAGAA TCTTCTTCGA CTGCCAAGAG CGGTCCAAGG CAATGGTCAG CCACTGCAGC 000560 000561 CCCCTGAGAT ATTTTTAGAG ACTGGACCTG AGGCCTCTGG AGGCTACTGA TGATGCCTGC TGTGAACGCA GACACTGGTG 000640 000641 TGATGCGATG CCTGCGCCTG CAGCGGCAGT GCCCTGGGCA CTATGGTTTt gagcttgtac ccagcgctgc ttttgccttg 000720 000721 ctctgtgacc ccaggcaagc tgcctcacct ctctgggcca gtttccccat cgtacagtgg TGCTGCACAC CCTGGCCCTG 000800 000801 GCCCCGAGGT GGCTGGGAGG TGGCTCCTCA AACAGCCGCT TTCTCATCAG TGCCCGGTGC TGGGTCAGGG ATCGACTGAG 000880 000881 GCTCTGAGCT AACTAGGAAA CACAGTGGCC TTGGAGGGCT GGGGAGTGTC ATGGGGGTGG GGACAGGGAG CCACCGGTCG 000960 000961 CATGTGACTG AACTCTTCAC CCCAGTCTGT GGCTTTCCCG TTGCAGTGAG AGCCACGAGC CAAGGTGGGC ACTTGATGTC 001040 001041 GGATCTCTTC AACAAGCTGG TCATGAGGCG CAAGGGTAGG AGGCAGGGCC GCTGCCCGCC CTGGGTCGGC ACCTTGTAAT 001120 001121 TCTGTCCTGC CTTTTTCTTC CTGTATTTAA GTCTCCGGGG GCTGGGGGAA TCAGGGTTTC CCACCAACCA CCCTCACTCA 001200 001201 GCCTTTTCCC TCCAGGCATC TCTGGGAAAG GACCTGGGGC TGGTGAGGGG CCCGGAGGAG CCTTTGCCCG CGTGTCAGAC 001280 001281 TCCATCCCTC CTGTGCCCCC ACCGCAACAG CCACAGGCAG AGGAGGACGA GGACGACTGG GAATCCTAGG GGGCTCCATG 001360 001361 ACACCTTCCC CCCCAGACCC AGACTTGGGC TGTTGCTCTG ACATGGACAC AGCCAGGACA AGCTGCTCAG ACCTGCTTCC 001440 001441 CTGGGAGGGG GTGACGGAAC CAGCACTGTG TGGAGACCAG CTTCAAGGAG CGGAAGGCTG GCTTGAGGCC ACACAGCTGG 001520 001521 GGCGGGGACT TCTGTCTGCC TGTGCTCCAT GGGGGGACGG CTCCACCCAG CCTGCGCCAC TGTGTTCTTA AGAGGCTTCC 001600 001601 AGAGAAAACG GCACACCAAT CAATAAAGAA CTGAGCAGAA A |
Predicted Small Protein
Name | NONHSAT139256_smProtein_380:577 |
Length | 66 |
Molecular weight | 7217.4049 |
Aromaticity | 0.0769230769231 |
Instability index | 74.4846153846 |
Isoelectric point | 9.41485595703 |
Runs | 10 |
Runs residual | 0.00355769230769 |
Runs probability | 0.0397632927045 |
Amino acid sequence | MLEALGRHQKSSALLPGLWLLPGLGAIVKLSSLSSPSPNCDRRIFFDCQERSKAMVSHCS PLRYF |
Secondary structure | LHHHHHHLLLLLLLLLLHHHHLLLLEEEEEELLLLLLLLLLLLEEEEHHHHHHHHHHLLL LLLLL |
PRMN | - |
PiMo | - |