NONHSAT139282

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Basic Information

Transcript ID

NONHSAT139282

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

2915 nt

Genomic location

chrY+:2477306..2525270

Exon number

9

Exons

2477306..2477522,2479037..2479079,2480191..2480259,2483857..2484010,2486781..2486825,2487470..2487538,2491426..2491494,2494638..2494683,2523068..2525270

Genome context

Sequence
000001 CTGGGCTGAG TTTGCAGGGC TGCTCCCCTC ACCCAACCCC TTCGAGTCCT CCGCGGGCTC CGCCCCACCC GGCCCGTGGG 000080
000081 GGAGGTTCCG TCCCGCCGCC TTCGCCCGCG CGCTGCACTC GCGGACGATC TCTGCTCGCC TTGGGCGCGC CGTGGCGCGC 000160
000161 GGGGCCGTGC TGGCGCTGCG GCTCCTCGGC CTGCTCCGCC GTCTGGTGGC CGCCCCGGGC TGACTTTGAC TTAGCGATGC 000240
000241 CTTTCCTGAT GGAGGAAACA GTGACCCAGC ACCACCTAAT GCCCCCAAAC CAAAGCCAGA TCCAAACCCC AACCGACCTG 000320
000321 GTTTCACTGG TGACCCAGCA CCACCTAATC CCCCCAAACC AAAGCCAGAT CCAAATCCCA ACTGACCTGG TTTCACTGAT 000400
000401 AAGAGCCTCT AACCCTACGG GGTGGTCTCT ATGTTGTTTA CCTGGCAGTG ATGTCCGTGT CATCTGAGAA GAGGAGATTT 000480
000481 CAGGGGCTGA CTTTGACTTA GCAGATGCCT TTCGTGATGG AGGAAATAAC GACCCAGCAC CTCTTAATTC ACCCAAGCTG 000560
000561 AAGCCAAATG CGAACCCTGA GCAGCCTGGA TTCATTGACG AGCCAGCACC ACTGAACCCA CCCAAACCAA AGCCAAATCC 000640
000641 AAACCCCAAG CAGCCTGATT CCACCGGGGA TGACTTTGAT TTCACAGATG TTTCTTCATG GTGAACGAAA CAAAGCATCT 000720
000721 CCTGGGAATC ACCCCTGACC AAAAGCCCCA GGCACCTCTC CAAGACCCCC TACAGAAGCC TAAACAGCCC TTACATTCAT 000800
000801 TGCCTTTGGA CCTACCCGAA GTCAACAAGT TCCAAACTCG TCAGAAACTG GGAGAAGTCT CAGCCCCAAA TCAATAGCAG 000880
000881 CCGTTGTCAG CTCCTCCCAG CTCAAAGTCC CCCAGAGATC GGTTCCCTGG TCTGAGTCAG GAACGAGAGA CTGAAAAGCA 000960
000961 TGGGGATCTG GTGCTTTTTC TTCATAGGGT TAGTCGCTTT CCCCACCAAA AAACCTACCA ACTGAAAGAT CACTGATTGG 001040
001041 ATGGGTCAAC CAGCCTCAGC TACCAGATGT CTTTGAGATG GGGAGCCAGC CCCCTAAAGC TGAGTCTCTG TGTGTGGCTT 001120
001121 CCAAATACCT GGTCCCCTGG GTGCAGACAG AAGAGAGGAC GCAGAGGCTG GACATCTCCC AGAGGAGGGG GAGACTGGCT 001200
001201 GGTCACCAGA TAATCTTGCT TCCCTCTCTG ATGTCATAGG AACATGAACA GACTTGGAGA TGCTGATTGA AAGTACATGT 001280
001281 CACCTGAAGG AGACATTGGT TCCAGAGCCA TTAATTCCTA ACCTCCTACC ATACTCTCTG CATGGTGGAA GATGCCAGAA 001360
001361 CATTCTCAGA GCTTGAgaaa aaagaggaat tgagagaagg gacgggggtc aagagataga gaaggtgaga ggaatgtgag 001440
001441 agaagcaggg gacggaggag aagagaggaa ggaTAACTCA GAAGCTCAGG TCTAACTTCA CCCCACTCCC CTTAGGACCC 001520
001521 CCCCACTCTA ACTGTTGTTT CTGAGAGTTC CTGGGGGCCA CCCATAAACA ATGAGGTTAA ATGTAAATGG AAGGGCAGGA 001600
001601 CTCTGTTGAA GTCTGCAGAA GGTACCCTGT TGGCTGCATA GTCACCAGCT CTCATGACCC AAAGAGGAGA GTGAGCAGGT 001680
001681 GACTGGATCA TCAGTGAGGG TAAATCTGGA AGACAGAATT GGAgccaggt gcagtggctc acaactgtaa ccccagcacc 001760
001761 tttggaggcc aaggtagaag gagcacttga gcctcaggag tttgagacca gcctgggcaa catagccaga ccctgtctct 001840
001841 acaaataatt tttaaaaatt CATTGAAGGA TTTCTAAAGA CCACTTGAGT GGTTTATGTC TCCTGGAGTC AGAACCCAGG 001920
001921 GAGGATTTTT GCTGAAATAC CAAAGCCGCA GGGAGCATGA ATAGAGATGT TCAGACAGAA ATTAAGTTTG AAGAAATAGA 002000
002001 CTTTGGCAGA GAGGCACGTG GCCACAGACA AGAACTCATC ATGCATTCAT TCTTTCACTC ACTCAGCAAA CATTAAATGG 002080
002081 ACTCTGTCTA ACTGCATTTC CCTCTCTTGA CAAGAGGGAT ACATCGGAGA GAGACAGGCT GAAGGAATGT AGAGTTGATA 002160
002161 TTGGACCTGG GAGCTTTCCA AAGGCACTGT GCTCTCCTGT GCCCTTCTTC GCATCCCAGT CTCTACGATG TTGACCGTGT 002240
002241 TCGTGGGTTT CACATTGCTG TTGACATACC AGAAAGAATA TGCATGAACC ACAGTGACAA ATGTCATTCA TAATCATTTT 002320
002321 CAGCACAGAA TAACCTACAG AAATGTCTTC TGTGTACCTT CCCCTGCAAT ATTTTGTGAT TCTGATGCAA CTGGAGACAA 002400
002401 AACATCTCTT ATCCATGGCC TCTCTTGAAT CAATTTTATC TCCAATCTGC CTTTTCATGG GTACTCTAAC AAGAAAGCAA 002480
002481 ACAAGGAAAG TTCAGCTGGT CTAGCAGTTC TGAGACAGCA AATTATCTCA CTGTTGATGT GGACAAAGAG CCTCTTGCAG 002560
002561 AAAGACTATA CTTAACTCTG AGAATCTGGG TCCCAGCTTT TTTTTTTTTA ATCCAGAGAG ACGTAAATCT GAAAGAATCT 002640
002641 GAGTCCCAGC CGAGCTGAGA GAGGAGTAAA ATCACGGAGG CATGCCTCCA CTCAGAACAC ATCATTATCG TGCTTTTATA 002720
002721 TGGAAGGCAC AGCCATTCAC TCATTGTCCG ATAGACGTTT CCATTGAACG TTGGATCTCT TCAAACCAAG TGTCTGCAAA 002800
002801 CATGATGGGT TTTGCACTGA TGCTGAGGAT GAATCCAACA GGAAAGATAC AGAGaaacat cacattgcac cccagagaca 002880
002881 tatgcaatta ttgtttattg attaaaaata TAATG
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Predicted Small Protein

Name NONHSAT139282_smProtein_236:466
Length 77
Molecular weight 8451.6687
Aromaticity 0.0263157894737
Instability index 48.1907894737
Isoelectric point 5.60296630859
Runs 13
Runs residual 0.0296430732002
Runs probability 0.045690486867
Amino acid sequence MPFLMEETVTQHHLMPPNQSQIQTPTDLVSLVTQHHLIPPNQSQIQIPTDLVSLIRASNP
TGWSLCCLPGSDVRVI
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHLLEELLLLLLLEEELLLLLEEEEELLL
LLLEEEELLLLLEEEL
PRMN -
PiMo -