NONHSAT140374
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT140374 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
568 nt |
Genomic location |
chr16+:7714766..7760846 |
Exon number |
4 |
Exons |
7714766..7714970,7726776..7726840,7759058..7759133,7760625..7760846 |
Genome context |
|
Sequence |
000001 TCAACTGCCG TTGTCTCCAA CCTCCTTAAT CCAATGTGAA AACGATCCTC GGTTCCTGTG TTTTGGATCT TGTGACCAGA 000080
000081 CTAACCTCGC CAGTGCAGGG GTTGGTGTGT CTGCATGGGA AATGCACTAA TATGGATGTT TCTCTTTGTG TGTGCACCCT 000160 000161 TGCAGTGTTG TTTACCAGGA TGGATTTTAT GGTGCAGACA TTTATGGTGG TTATGCTGCA TACCGCTACG CCCAGCCTAC 000240 000241 CCCTGCCACT GCCGCTGCCT ACAGTGACAG TTACGGACGA GTTTATGCTG CCGACCCCTA CCACCACGCA CTTGCTCCAG 000320 000321 CCCCCACCTA CGGCGTTGGT GCCATGAATG CTTTTGCACC TTTGACTGAT GCCAAGACTA GGAGCCATGC TGATGATGTG 000400 000401 GGTCTCGTTC TTTCTTCATT GCAGGCTAGT ATATACCGAG GGGGATACAA CCGTTTTGCT CCATACTAAA TGACAAAACC 000480 000481 ATAAAAACCT TCCAATGTGG GGAGAAAGGA AGCTTTCCGA GGCCTGAGTA TTGCAATACA TGCAGTAGTA CATCATTTTA 000560 000561 GCAACTCT |
Predicted Small Protein
Name | NONHSAT140374_smProtein_131:346 |
Length | 72 |
Molecular weight | 7781.3476 |
Aromaticity | 0.056338028169 |
Instability index | 42.3295774648 |
Isoelectric point | 4.63470458984 |
Runs | 12 |
Runs residual | 0.0204595997035 |
Runs probability | 0.0660292645586 |
Amino acid sequence | MDVSLCVCTLAVLFTRMDFMVQTFMVVMLHTATPSLPLPLPLPTVTVTDEFMLPTPTTTH LLQPPPTALVP |
Secondary structure | LLEEEEEEEEEEEEELLHHHHHEEEEEEEEELLLLLLLLLLLLLEEEELLEELLLLLLLE EELLLLLLLLL |
PRMN | LLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLL |
PiMo | ooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiiiiiiiiiiiiiiiii iiiiiiiiiii |