NONHSAT140957
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT140957 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
743 nt |
Genomic location |
chr16+:20851175..20855984 |
Exon number |
3 |
Exons |
20851175..20851790,20855256..20855348,20855951..20855984 |
Genome context |
|
Sequence |
000001 CAAAAGGGTA AGTGAATGGG TTCTGCTGAA TGATTTATTT AGTGACTTAT TATAACCTCT CATCATTAAG GAAAGTAATA 000080
000081 CATGCTTTAT TTAAtttgtt gtgtttttct ctagattttt actatctgca tattaacatt taaaaatatt tttatgaaaa 000160 000161 tgggaatcag actatgcata ctgttttgca actttatttt ttcatttaac agtatatcat acatctttct gtatcactac 000240 000241 atatcttatt tcccttgttt ttaatggcta catagtattc tgctatatga tatacctatt aacatttgtg ctttatacat 000320 000321 ttttgctatt acaaataata cttcagtgaa catccttgga catTTGGCAA GTATTTATAT CAAAAAAATC TTTGGTGAAT 000400 000401 AATCCCATGC ATTGACTCAT GATTTCAGTT CTCTTTCCAT ATTCATTCCC ATACTATATT CTGTTGTTTT TCCTACAGAT 000480 000481 GAGGATCAAG TGGACAGAGA TATCAACTGT CTATGCTGGG CCATTTAGCA AAAATTGCAA TCTCAGGGCT CTGAAGAGGC 000560 000561 TGTTTAAAAG CTTTGGCCCA GTCCAGTCAA TGACTTTTGT TCTTGAAACC CGTCAGCCTC ATCTCTGTAT ACAGTATGAA 000640 000641 GTCCTAGAAG CTGCCCAGCT GGCCATAGAA TCCTTGGATG GTATTCTGGT AGATGGTATC TGCATCAAGG TGCAGAGGCC 000720 000721 TGTGACAGAG CTCACGCTTG ATT |
Predicted Small Protein
Name | NONHSAT140957_smProtein_29:142 |
Length | 38 |
Molecular weight | 4515.3403 |
Aromaticity | 0.216216216216 |
Instability index | 56.0813513514 |
Isoelectric point | 7.92694091797 |
Runs | 7 |
Runs residual | 0.009422266303 |
Runs probability | 0.0338657985718 |
Amino acid sequence | MIYLVTYYNLSSLRKVIHALFNLLCFSLDFYYLHINI |
Secondary structure | LEEEEELLLHHHHHHHHHHHHHHHHHHLLHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLL |
PiMo | iiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTToo |