NONHSAT141568
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141568 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1840 nt |
Genomic location |
chr16-:29114978..29119032 |
Exon number |
2 |
Exons |
29114978..29116460,29118676..29119032 |
Genome context |
|
Sequence |
000001 CTTATTCCGA GGAGACTTTC CTGGGCCTGA CTCCCGGACC TGTCCCCAGC GCCTCGCGGC CTCTCGAGCC CCTTCAGTGA 000080
000081 CCAAGATGCA GAGATCAGGA CGCCATTGCA CCACCCCAGG TGCCCGCCTC TAGCTGGCTC CGCCTGGGCC CCGAGGGAAG 000160 000161 GTGAGGTCGG GGGGGCCGGG CCAGGGCGTG GCAGCCAGGG TGTTTGTCCG CCGGGCTTGC TGCCTCTGGT GGCCCGGCAG 000240 000241 CACCGTCCCA CCTCTGCCAC CCTCCGATGG GGCCGCTACC TGCGTGCCTG CCAATCATGC TGCTCCTGCT GCTGCTGCTG 000320 000321 CTGCTGCTGC TTGGACCTGG CCCCAGGTCT GGCGAGGGGT CTGGCGCTGT CGCCCAGGTT GGAATACAGC GGTGCAATCT 000400 000401 CAACTCACTG CAAACTCCGC CTCCCAGGTT CAAGCAATTC TCCTGCCTCA GTCTCCTGAG TAGCTGAGAT TACAGATGCC 000480 000481 TGCCACCACA CGCAGCTAAT TGGTTGGGTG TGGTGGGGCT TTCCAATGAT TACTTATTAA TGATTACTTA TGAAAAACAA 000560 000561 CAACAAAAAA GCCATCTTGA AGCTGCTTTT AATGAGAGAA CAAATGTGCT CCCAAGCAAC AGAGCAGCGA AATTCTTTAT 000640 000641 TACTGGATTC TAACTTTCCT CTCTAACTGT AACTGTCTCA GCTCCACCTC ATGTGACTTG GAGGGTATGT TGCAACCTGC 000720 000721 GTCTTCACCA CCCATTCATG AAGATCTATA AAACTAATGT AAACTGCTGG GGCAATTTCA ACATGAGTCA ACTGGAGATT 000800 000801 GTTACTTGGT GAGAATGCGC AAGTGGCAAA GATCTAAATT TGTTCAGCTA ATTTGTAATT AACCTTCGCT TCTCACATGT 000880 000881 CAGTATGTGA AGTGTCTGGT TTAAGCAATT TATCCAAAAA AGCCATAGAC TCTTTAAATA ACAACAAAAC CTGGGCCTGG 000960 000961 AATTTTATAA AGGCAGAATG AGTAAGACAC GGTTTCGGTG TGCTTTTTTA AAGAAAACAG GGTCTTGCTC TGTTGCCCAG 001040 001041 GATGAAATGC CATGCTGCAT TTACAGCTCA CTGCAGCCTT GACCTCCCAC CTCAGCTTCC AGAGGAGCTG GGATTACAGG 001120 001121 TGTGCACCAC CACGCCCAGC TAATTTAAAA AATTTTTGTA GAAACAGGGT GTCACTGTGT TGCCCAGGCT GGTCTCCAGC 001200 001201 AATCCTCTGG CCTTGACCCC CTACAGTGTG GGGATTACAC CCATGAGCGA CTTGCCACTT ACTATCACTA TCTGACTGTG 001280 001281 ACCTGGAACC AGAAAGGAGA TTCCGAGAGT GTGCTCAATC AATCACAAAC TGACCTTTTT CATGGGTTTC TTGAACTCCT 001360 001361 GTAGCTCTTC AGCACTCATG TCTTCCCATA CCTGATAAAT AGGATCAATG AATTTCTTTG ACCTGTCAAC AAAGATCACA 001440 001441 TTTCAAAGTC AAGTTAAATA CTTCAGCAGA AGTCAAAATT GGTTTGGATC TTTTCTCACA AGATCTATTA CCCAAAACCA 001520 001521 AGAAGTGAAA ACTACAGCTT AAATAATTAC ATTTAAAAAA ACCTGGCTGG GCGCAGTGGC TCACGCCTGT AATCCCAGCA 001600 001601 CTTTGGGAGG CTGAGGTGGG CAGATCATGA GGTCAGGAGA TCGAGACCAT CCTGGCTAAC ACGGTGAAAC CCCATCTCTA 001680 001681 CTAAAAATAC AAAAAATTAG CCGGGTGTGG TGGCGGACGC CTGTAGTCCC AGCTACTCAG GAGGCTGAGG CAGAATGGCC 001760 001761 TGAACCTGGG AGGCAGAGCT TGCAGCGAGC CGATATCATG CCACTGCACT CCAGCCTGGG CGACAGAGCG AGACTGTCTC 001840 |
Predicted Small Protein
Name | NONHSAT141568_smProtein_266:466 |
Length | 67 |
Molecular weight | 6912.3224 |
Aromaticity | 0.030303030303 |
Instability index | 48.1212121212 |
Isoelectric point | 9.21307373047 |
Runs | 8 |
Runs residual | 0.0293957539467 |
Runs probability | 0.0413906553612 |
Amino acid sequence | MGPLPACLPIMLLLLLLLLLLLGPGPRSGEGSGAVAQVGIQRCNLNSLQTPPPRFKQFSC LSLLSS |
Secondary structure | LLLLLLHHHHHHHHHHHHHHHHLLLLLLLLLLLLEEEEEEEEELLLLLLLLLLLLLLEEH HHHLLL |
PRMN | - |
PiMo | - |