NONHSAT142246
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT142246 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
847 nt |
Genomic location |
chr16+:35071257..35072103 |
Exon number |
1 |
Exons |
35071257..35072103 |
Genome context |
|
Sequence |
000001 TCTTATCTCA GACCCTACTT GGGTTTCTGG GGAATTTCTT TCTTCTTTAC CATTATAGTT TCCTTTATTT CACCAGGTGC 000080
000081 ACATTAAGGT CCACGGATTT TATTCTCAAG TACCTAACTG TAGCCAACTT CTTGATCACC CTCCCTAAAA GAGTCCCACA 000160 000161 GCAGACTGTG GCCACGTTGG GGGTGAAATA TTTCCTCAGT GATATTGGGT GCAAACTTGT TTATGTTCAC AGAGTGGTCA 000240 000241 GGGGTGTGTC CATTGGTACA ACCTGACTAC TGAGTATCTT CTAGGCCATG ATGATTAGCC CCATGAACTT GAGATTGGCA 000320 000321 GAGTTGAAAC TACAAGCTCC CAAGTACATT GGGTCCTCCA AAATACTGTG CTGGATTGTG AATATACCGG TAAATATTAC 000400 000401 TTTTTCTATA AATATGACTG GGAAGTGAAA TGGCAAAAAC AACACAAAGA AAAAGGATGT GGGATACTGC TCTGCAGTAG 000480 000481 TTAACAAATT TACAGGATTA CTGCATATAA CATTGTCATC ATCCTATGAT GTTTTGTGTT TTTGCCTCAT GGCCTGGGCT 000560 000561 AGTCAGTGAC TCCATGGTGT TGATCCTGTA GAGGCACAAG CAGCGGGTCG AACAAACTTA TAGGACCAAC CTCTCTCCCA 000640 000641 GCCCCTCCCC TGAGTCCAGA GTCACTCAAA GCATTCTTGT CCTAGTGAGC ACCTTTCTAT TGTTTCATAT TGTCTTCTCC 000720 000721 ATCTCATCGT TATTTTTTAC CATTTTACCT AACTCCAGTT GGTGGCTGGT GAACACCTCT GCCCTGATTA CTACTTGTTT 000800 000801 TGCTACAGTT AGCTTCTTTA TTCTCATGAG CCATGACCGC AGCATGT |
Predicted Small Protein
Name | NONHSAT142246_smProtein_287:427 |
Length | 47 |
Molecular weight | 5179.3018 |
Aromaticity | 0.0652173913043 |
Instability index | 59.7 |
Isoelectric point | 9.86492919922 |
Runs | 7 |
Runs residual | 0.00918737060041 |
Runs probability | 0.0940646528881 |
Amino acid sequence | MMISPMNLRLAELKLQAPKYIGSSKILCWIVNIPVNITFSINMTGK |
Secondary structure | LLLLLLLHHHHHHHHLLLLLLLLLLEEEEEEELEEEEEEEEELLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLL |
PiMo | ooooooooooooooooooooooTTTTTTTTTTTTTTTTTTiiiiii |