NONHSAT142296
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT142296 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
828 nt |
Genomic location |
chr16+:47495242..47582075 |
Exon number |
2 |
Exons |
47495242..47495337,47581344..47582075 |
Genome context |
|
Sequence |
000001 aaggcggcga ccggagcgcg atggcggggg cggcggGACT CACGGCAGAA GTGAGCTGGA AGGTCTTGGA GCGAAGAGCT 000080
000081 CGGACCAAGC GCTCAGGTCT CTTTTATTCA AAACCTTGTA TTTTGTGTGG AAAGAGTTTA CCGTGTGCCT GACTTTGGTG 000160 000161 TCTGGGAAAG AGGAAGCAAA TATAATAATG GCAGCACAGA GCTACATTCG AGGTAATTTG CTGATTTCTG AGGTTTTTTT 000240 000241 TTTAAATTAA ATGTATGGAA TTTGAATATG AAGAAATACT GAAGCATTAG ATTGGAACTG TGATTCATAT GTTAATTTGT 000320 000321 AGCAATTTTT TTCTACCTAT GATGCAGATG GAAGTCACTT AAAATTAACA CAAAAGAGCC CATCCTCAGT ACCCATAAAC 000400 000401 AGATGCAAGA AAGAAGTAGG TGTCTTTCCC AACCTCCCAA GGTGTCAGTA CATGCATGTC AGCCCTCATC ATTAATCCAC 000480 000481 AGCTTGGCCT TTCTGCTCAA CCAAGTCATT TTCTTTTTCC TCTTTGAAAT TACCTCATTT GAAATGTCAA GTACATTAAA 000560 000561 ATTTTCAAAC ACCAGTTGTA TATGCACTGA ATATAAAATT TCCTTCCATG TTATAGAGCT GATTTTTATC CTGACCACGG 000640 000641 ATGCTTACAC TGTTCACATA AAACTTAACA TTCATTGTTA CCAGTAAGGT GTGTGATCAA CATCTTGAGC TGTGGTTTAC 000720 000721 TGCGTTTGAA TAAGCAACAA TAGCTGATAA CTGATGTTAG TAGTTTATGA ATTTCTTTTA ATCCTTAGGG TTAAGGAAGT 000800 000801 AGCTTTAGTG ACTGATTGTA CCTTTCCT |
Predicted Small Protein
Name | NONHSAT142296_smProtein_20:151 |
Length | 44 |
Molecular weight | 4627.4845 |
Aromaticity | 0.0697674418605 |
Instability index | 49.1141860465 |
Isoelectric point | 9.92547607422 |
Runs | 7 |
Runs residual | 0.0054873268879 |
Runs probability | 0.0384712443536 |
Amino acid sequence | MAGAAGLTAEVSWKVLERRARTKRSGLFYSKPCILCGKSLPCA |
Secondary structure | LLLLLLLLHHHHHHHHHHHHHHHHLLLEELLLEEEELLLLLLL |
PRMN | - |
PiMo | - |