NONHSAT142732
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT142732 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
907 nt |
Genomic location |
chr16+:57093095..57095916 |
Exon number |
2 |
Exons |
57093095..57093444,57095360..57095916 |
Genome context |
|
Sequence |
000001 CTCTGCCTTT CTCTGAATCT CAGGGTTTCC TGGGCATGGG ATCATAATTT CTATCCCCTG ATGCCCGGGT GCCATGGGGA 000080
000081 CCATGGAGGC CATGGGGTGG GAAGGCCAGG TATTGCCATG CTCACAGAAT GAGTTTGGGG GTCTCCTCTG GTTCTGAGGC 000160 000161 CTCCATCCTC CCTTGTCCTT GTGGGTGCAG CCCCGCTTCC CTCTCTGTGC CCTGTGGGTG CCCTAGGTGC CTAGGAAGCT 000240 000241 GGCATGTCTG GGCACCGTGC TTCCCCAGGC CCTTCTCTCT GCAGCCTGGG CTCTGAGCAG AGCTTCCGGA TTCACTTCTC 000320 000321 CAGAGAGGAC CAGGCTGGGA AGACACTCAG GCTAAGTGAG TGCAGCTTCC GGCCAGAGCA CGTGTCCAGG CTGGCCACCG 000400 000401 GCTTGAGCAA GTCCCTGCAG CTGACGGAGC TCACGTGAGT GACCCACCCA GCCCGTGAGG ACAGCAGAGG GGTGGGGGCA 000480 000481 CCCTGCCAGA GCCACCTCAG TGACTGACCT CTGTCTCCAG GCTGACCCAG TGCTGCCTGG GCCAGAAGCA GCTGGCCATC 000560 000561 CTCCTGAGCT TGGTGGGGCG ACCCGCAGGG CTGTTCAGCC TCAGGTACCT CCTCCCCCGC TGCCTCCGGG AGGGGCCATG 000640 000641 GCATGAATGG GAGCAGGGGT GGGCACTGGA GTAAGAGGCC CCCAGGATCA TGGCCCCAGT CATTTCCTGT ACCCACAACC 000720 000721 CTGCCATCTG GACCCTGAGC AAACCCTGTC CATCTGTCCC AGAGACTCCA CAAGGCACAC AGAGAAACTG TCCTTCCCCA 000800 000801 CACTGGAGGC CTGTGCTTTG GGATTTaaga aaaaaagaaa gaaagaaaga aagaaGGTTT CAGAGGATAC TGAACTGAGG 000880 000881 ACAAAAATAA ACTGAAACGA AGTTCTT |
Predicted Small Protein
Name | NONHSAT142732_smProtein_689:877 |
Length | 63 |
Molecular weight | 7317.4732 |
Aromaticity | 0.0645161290323 |
Instability index | 82.6516129032 |
Isoelectric point | 10.5286254883 |
Runs | 9 |
Runs residual | 0.00847926267281 |
Runs probability | 0.0181946652535 |
Amino acid sequence | MAPVISCTHNPAIWTLSKPCPSVPETPQGTQRNCPSPHWRPVLWDLRKKERKKERRFQRI LN |
Secondary structure | LLLEEELLLLLLEEEELLLLLLLLLLLLLLLLLLLLLLLLLLHHHHLHHHHHHHHHHHHH LL |
PRMN | - |
PiMo | - |