NONHSAT143810
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143810 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
631 nt |
Genomic location |
chr16-:77775480..77794613 |
Exon number |
3 |
Exons |
77775480..77776006,77791284..77791349,77794576..77794613 |
Genome context |
|
Sequence |
000001 ATTTATTTAC TTGCCTTTCT CCATGAAGGC ATCTCCAGCT CATCCAAGAT CAACTGCAGA GGAGGACGAG GGAAATTTTA 000080
000081 TATGGGAACA ATTATCTGAA AAATACAATA GAAGGCAACT GGAAAAGAGG CAAGGATTCT AACTACATAC TGCAGAAAAA 000160 000161 ATATTCACAC CTGTCAAATT CCAACAGCTG GCATTGTTGT TGTTCTACGA ATAAGCACAC ACAGAATCCT CGTGAATAGT 000240 000241 TCTTTGTCTC TTGCTCTAGT AAATCATAAC CTGCTTGTAG CTTTTTTATG AACCTTCAGG AATAACTCTT CAGAGGATGC 000320 000321 TAATACATCA TTAAGATTAA ATTGAACCTC AAAGGTGGGT TTTTTTTCCA AAATGATAAA GGCCACCAAC ACTGCAAGGT 000400 000401 TTGCCGTCAT TCCCTTGATC TGGTAAGTGA CACCGTCTTC AGGGTTTGTG TACTCAAAGA TATGATTAAT AAAACGGTGA 000480 000481 CCAAGACGTG TGACGTAATG CTGGTCATGG ACCTGTGGAT GCAGGAAATA GGCCAGAGGC ACCAGGAATA CATCCTTAAC 000560 000561 TTCAGCAGGA TTCGGCTGGG CCTGGAAGTT GTGGTCTATT AAACCCACAA ATGGAGTTAT CAATGTATCT G |
Predicted Small Protein
Name | NONHSAT143810_smProtein_461:601 |
Length | 47 |
Molecular weight | 5515.5189 |
Aromaticity | 0.0869565217391 |
Instability index | 46.1434782609 |
Isoelectric point | 6.52386474609 |
Runs | 8 |
Runs residual | 0.0125517598344 |
Runs probability | 0.0283739621975 |
Amino acid sequence | MINKTVTKTCDVMLVMDLWMQEIGQRHQEYILNFSRIRLGLEVVVY |
Secondary structure | LLLLEEEEELLLLHHHHHHHHHHHHHHHHHHHLLLEEEELEEEEEE |
PRMN | - |
PiMo | - |