NONHSAT143908
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT143908 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
557 nt |
Genomic location |
chr16-:80718501..80769030 |
Exon number |
2 |
Exons |
80718501..80719026,80769000..80769030 |
Genome context |
|
Sequence |
000001 GAGAAGTTCT CACCCTTGAG GGTGGACAGA GGTTGAAAGG ATTGTAGACA AGAGGAAGAA CAAGAAAGGA AAATGGGAGT 000080
000081 ATCTTATCCG ATGGAAAGGC TACGGGAGCA CCGAGGACAC GTGGGAGCCG GAGCACCACC TCTTGCACTG TGAGGAGTTT 000160 000161 ATTGATGAAT TCAATGGGTT GCACATGTCC AAGGACAAGA GGATCAAGTC AGGGAAGCAG TCCAGTACCT CCAAGCTGCT 000240 000241 GCGTGACAGT CGAGGCCCGT CGGTTGAGAA ACTGTCCCAC AGACCTTCAG ATCCTGGAAA GAGCAAGGGG ACCTCCCATA 000320 000321 AACGGAAGCG AATTAACCCT CCCCTGGCCA AGCCAAAAAA AGGGTATTCA GGCAAGCCCT CTTCAGGAGG TGACAGGGCC 000400 000401 ACCAAGACGG TGTCTTACAG GACTACCCCC AGTGGTTTGC AAATAATGCC CCTGAAAAAG TCTCAGAACG GGATGGAAAA 000480 000481 TGGGGACGCC GGCTCTGAGA AGGATGAGAG GCACTTTGGA AATGGGTCCC ATCAGCCTGG CTTGGATTTG AATGATC |
Predicted Small Protein
Name | NONHSAT143908_smProtein_164:445 |
Length | 94 |
Molecular weight | 9953.5024 |
Aromaticity | 0.010752688172 |
Instability index | 80.5989247312 |
Isoelectric point | 9.48504638672 |
Runs | 9 |
Runs residual | 0.034149741139 |
Runs probability | 0.038715185774 |
Amino acid sequence | MNSMGCTCPRTRGSSQGSSPVPPSCCVTVEARRLRNCPTDLQILERARGPPINGSELTLP WPSQKKGIQASPLQEVTGPPRRCLTGLPPVVCK |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLLEEEEEEEELLLLLLLHHHHHHLLLLLLLLLLLLLL LLLLLLLLLLLLLLLLLLLLLEELLLLLLEELL |
PRMN | - |
PiMo | - |