NONHSAT144318

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT144318

Source

NONCODE4.0

Same with

,

Classification

sense

Length

559 nt

Genomic location

chr16-:87760427..87764612

Exon number

2

Exons

87760427..87760530,87764158..87764612

Genome context

Sequence
000001 atgtgtttca agatatttct ctgtctgttg cttgtctttt tattttctaa tggtgtattt ttgaagtttt ttatgttggc 000080
000081 ggagtccagt ttataatgtt ctacctagga aatctttatg cagtccaagg tcttggagat gttctcctgt tttattcttg 000160
000161 aggtttGAGC TTAGCTAGCT GGGCTCTTAG CAGGATGGTT TTGGTAGTTG ATAGATCAGA TTAAATGGTA TTTAATTTGT 000240
000241 GAGCAGTAAG TGCTCACAAA ACAGAAATCA GTGTAAAAAT TGGATTTTGT TTGTTGTTGT CGTCTTTAGA ACAACCAGAA 000320
000321 ATTAAGCAGG TTGATAGTGT CTTTTTGTTT ATTTCATTTT AGATCAACAG GCGGTCCTTC GGGTCGGAGT GGACATCGGA 000400
000401 TGGTGGCCTG GAAGAGACAA TTGATCCTGT TTGGTGGCTT CCATGAAAGT ACACGGGATT ACATCTACTA CAACGACGTG 000480
000481 TATGCCTTTA ATCTGGACAC CTTCACATGG AGCAAGCTGT CCCCGTCAGG GACGGGGCCC ACACCCAGAT CAGGCTGCC
[back to top]

Predicted Small Protein

Name NONHSAT144318_smProtein_95:160
Length 22
Molecular weight 2383.7568
Aromaticity 0.238095238095
Instability index 47.8057142857
Isoelectric point 3.79937744141
Runs 6
Runs residual 0.0394557823129
Runs probability 0.0338426661955
Amino acid sequence MFYLGNLYAVQGLGDVLLFYS
Secondary structure LEEHHHHHHHHHLLLLEEEEL
PRMN -
PiMo -