NONHSAT144758
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT144758 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
504 nt |
Genomic location |
chr17+:657549..658128 |
Exon number |
2 |
Exons |
657549..657571,657648..658128 |
Genome context |
|
Sequence |
000001 GCTGGAGTAT GGAGTAGTAA ATGATCATGA CATCAGGTCA GCTGCAGTTC TCACTGGGAC CAATAAACAA TAGAAGCAAC 000080
000081 AACCATAAAG ACTTAAGAGG ACAAAGGAAA CCAAACCTCA CTGTGTGTCT TCAAGATCTG TTCACATAGT TGCAGGAAGT 000160 000161 TGCTGTAGAC AAAGTACATT ACTAAAGAAT GAAGCCCACC CAGGACATCA CAGCAACGAA AGAACTATTT CTGGTAACTG 000240 000241 TGGACCAGGT GAGAGCCACA CTGTAGAACA GCAGTGCTGC CCTCTCTTCT TTGGCGAATG TTATGAAGAC ATTCTGATGC 000320 000321 ACTTAGGATC ATGATTCATG TTAAATGTAA ATTAATTGTA AAAATAATAC ATCTTGCTCC AAAATGTGGT GACAATTTAG 000400 000401 AAGCTGTCCA CATAGCCAGA CCACTCTGTA AATCACAGAA CCTAGAAAGT AAAAATGTGC CATAATTAGG ACAGCAGAAA 000480 000481 GTAACAGTAA AATAAAGTTT TAAA |
Predicted Small Protein
Name | NONHSAT144758_smProtein_20:148 |
Length | 43 |
Molecular weight | 4787.4631 |
Aromaticity | 0.047619047619 |
Instability index | 48.8452380952 |
Isoelectric point | 10.0442504883 |
Runs | 9 |
Runs residual | 0.038125376733 |
Runs probability | 0.04407348525 |
Amino acid sequence | MIMTSGQLQFSLGPINNRSNNHKDLRGQRKPNLTVCLQDLFT |
Secondary structure | LEELLLLEEEELLLLLLLLLLHHHLLLLLLLLLEEEELLLLL |
PRMN | - |
PiMo | - |