NONHSAT144855
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT144855 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
1351 nt |
Genomic location |
chr17-:1614798..1619566 |
Exon number |
3 |
Exons |
1614798..1615693,1616997..1617308,1619424..1619566 |
Genome context |
|
Sequence |
000001 CTCGTGCGTC ACGACGCCGC CAGCTGATCG GAGCCTGGAG CCGGTGTGTG CTGGGTGCCG AGAAGAGACA GCGCCGCCGG 000080
000081 CCGTGGGGAG CGGACGCAGT GATTTGCTCC CCCTCGTGCA GCAACCCCCA CACCCAGCAC CAGGAGCCTG TTCCTCTCAC 000160 000161 GCCCTCACCT GGCTGAGCCG CAGTAGTTCT TCAGTGGCAA GCTTTATGTC CTGACCCAGC TAAAGCTGCC AGTTGAAGAA 000240 000241 CTGTTGCCCT CTGCCCCTGG CTTCGAGGAG GAGGAGGAGC TGCTTTCCCC ATCATCTGGA AGGTGACAGA AATGGGCTGG 000320 000321 GAAGGTCCGA ACAGCAGGGT GGATGATACG TTTTGGGCAA GTTGGAGAGC CTTTGCCCAG ATTGGCCCAG CAAGGAGCGG 000400 000401 TTTTAGATTA GAGACACTGG CTGGATTGAG GAGTAGAAGG CTCAAACAAC CCAAGGCTTT CTGCCTCCGA GATGTGGCAC 000480 000481 CATAGTGCGG TGCCCTGTGG CTTCACCGCC CTACTTCCAC CTCCGCCCAG CCTGTAATGT TTATATAAGC AGCCTCAAGG 000560 000561 ACCAAGAACC ATCTGCGAAA GGACACACAC AGGAAATTCA TAAAAGAAAT CTGAATGGAT AAAACCATGA AAAAAAGTAT 000640 000641 GCTTCATTAG TAATTAAAGA AAGGCAAATA GAGCTGGAAG CATTTTTCCC TTAGCAAACC ATAACAGAAA AAAATAAGAC 000720 000721 CCAATATTGG CAAAGAGACT ACTGAAAAAA CATTCCCATA CATTGCGTGT GGGAGTATAC ATCGGTGCAG GCTTCCTGGA 000800 000801 TGACAGTTGG GTGATATGTG TCATGTGGCC TAAAAGCCTC CATGTCATTT GACCTACGAA TTCTATCTTT GGGAATTTAT 000880 000881 CCTAAGAAAA TACTTAAGGA TTTAGTTAGT GATAAGATGT TCATCCCAGC ATTGCAATGG AGAAAAATGG GAAGCAATGG 000960 000961 TTTGGTTGGG AATTTATTCC TTTTCTGCTG TAACGAAAGT TTGCAATAGG GGATTGCTTA AGTAAATTAT TGTATCTCCA 001040 001041 TCCAGATGGT GGAGTACCGC GCAGACATTA AAAGTCATGT AAAAGAACAT CTGACTGAAA GAAAAATGCT CCTTGAATAT 001120 001121 TAAAAGGTTG TAAAAATAGT GCATGTTATG TGATTTCAAT TTTGTTTTTT AAAATATGGG TGTATGCTTG TATACGTAGA 001200 001201 GCAGATAAAA AAGACGGAAG GCATACTAAA AAATGTTGAG TGGTTATCTT TGTATGGTGG AACAAAGTCA CTGTAATTTT 001280 001281 CATCTTTGGT TTTTCTGTAA TTTCCAAATT TTCCACATTT TGTATTTCAT ATAATATAAT TTAAGAGATC A |
Predicted Small Protein
Name | NONHSAT144855_smProtein_311:484 |
Length | 58 |
Molecular weight | 6478.3477 |
Aromaticity | 0.122807017544 |
Instability index | 61.4 |
Isoelectric point | 11.2123413086 |
Runs | 9 |
Runs residual | 0.00394736842105 |
Runs probability | 0.0473709003121 |
Amino acid sequence | MGWEGPNSRVDDTFWASWRAFAQIGPARSGFRLETLAGLRSRRLKQPKAFCLRDVAP |
Secondary structure | LLLLLLLLLLLLLHHHHHHHHHHHLLLLLLLLHHHHHHLLHHHLLLLLLEELLLLLL |
PRMN | - |
PiMo | - |