NONHSAT145226
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145226 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1182 nt |
Genomic location |
chr17+:5377610..5389487 |
Exon number |
7 |
Exons |
5377610..5378109,5383374..5383464,5383707..5383902,5384616..5384709,5386129..5386202,5388471..5388536,5389389..5389487 |
Genome context |
|
Sequence |
000001 ACTAGTTCTA GATCGCGAGC GGCCGCCCTT TTTTTTTTTT TTTTTTACAG TGAGAGAAAA ATGGAATTCC GTTTTATTTT 000080
000081 GTCCTCTCTG AAACTTCCAT TTACACCATG GCCTCATCTA TCAAGAAGAG GAAGAAAAGG CTCTGCCTTA TACCATAAAA 000160 000161 ATCAAGTACT CATGTACTTG TTAGAGGTGG CAGGATATTT GTTTCTCCAG TTTTTTGGCT CTAAGAAATT ACACTTTCAG 000240 000241 TACCAGTGTA GTGAGGAACC ACTGGCAAAC TGTTGGAAAT GTCTTCTGGA TTAGTCAGTG TACCATTTCA TAAAGTGCTT 000320 000321 CTGGAGTTAA AATCTGCCAA GCTGTCAAAA GTGTCCACAC TTTTGCAACA AAGGATAAAA GATCCCAGTG GGTATCACCG 000400 000401 AGTCCTTCCC AGCTGGGTCT CATTATTGGC ACTGCTGCTT TAACCTCCAA GCCGCTGGCC CTCACCCCAG GCGAAGCCTC 000480 000481 CTGGCCGTTC CTCAGGTAGT GGATTGTAAT TTGGATCCTC ATCTGGTGTA TCAAAAATAG CTTTCAAAAT AGATGGTGTT 000560 000561 TTCAGAATTC TTATTCCACC AGGTTGATTG GGAAATACAT CTTCCAAGAA AAAATATATG TGTCCAACTG CAATACCCAA 000640 000641 AAGGTCCACA ATGATTGAGT TCCCCAACAA CAAGGAAAAT CCCATGAGCA CCCAGGGCAG AAAGGGGGCC TGGAAGTTGA 000720 000721 GAAGGCCGAA GAAGTTCATG CGGACATAGG GGTTCCTTCG GCTCCACACA TAGACGAGCA TTATTGTAAA GGCCTGGCCC 000800 000801 AAGAAAACTA AGCTCACAAA CAGACCAAAA AGGGTCATTA AGAATCCACC AAAAAGGAAC ATAAATACAA AGTCTGCTGT 000880 000881 CCGACCTCGG AAAGAGCCTT CTTCTAGCAT TCGACAGTAA CGATATAGAA AAATCATGTT AAATAAAAAA TTGAATCCAA 000960 000961 CTGGCCCAAA AAAATAAGAA GTTGGTGATT AATCTCCATA TTTGAAAGTG TTTAAAGATT AATTCAGGAT TGAAGTACAA 001040 001041 CTGAAAAGGT GTGATCAATT CCAACTGCAC GGCGGCGGTG GTGAGGACGC AGGCAGTGGT GTAGGCGCGG CTGACCGGTG 001120 001121 GGATCTGCAG GTACTCCAGC CGCAAGCTCT GGTACGCCAT CTTCCCTAGT TCTAGATCGC GA |
Predicted Small Protein
Name | NONHSAT145226_smProtein_278:442 |
Length | 55 |
Molecular weight | 5985.1355 |
Aromaticity | 0.0555555555556 |
Instability index | 44.6203703704 |
Isoelectric point | 10.2888793945 |
Runs | 11 |
Runs residual | 0.0410117434508 |
Runs probability | 0.0433909845675 |
Amino acid sequence | MSSGLVSVPFHKVLLELKSAKLSKVSTLLQQRIKDPSGYHRVLPSWVSLLALLL |
Secondary structure | LLLLLEELLHHHHHHHHHHLLLLHHHHHHHHHHLLLLLLEEELLHHHHHHHHHL |
PRMN | - |
PiMo | - |