NONHSAT145272
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145272 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
518 nt |
Genomic location |
chr17+:6544628..6546439 |
Exon number |
4 |
Exons |
6544628..6544818,6545073..6545154,6545569..6545644,6546271..6546439 |
Genome context |
|
Sequence |
000001 AGGCAGAGTC TTGGTTCCAG ACATCCGCGG AGCAATCTGA GCTGTCCCCA AGTCTCCTTC TATTAAATCC TACCCCGCCC 000080
000081 TGCCAAGAGC GCTCTTCCTT TTACCACCTT ACCCGGATGA TCTTGGAATC TAGTTCCTTA AAACTTCTCA CTCCCCCAGT 000160 000161 ACCATTAGTG TCTTACAGGA TACGTGAGTT GCTGAACCAG TCGTACGAGA GGGGCTGAAG CACATTAGTG AAGGATGTGT 000240 000241 GTTCATCTAC TGCCAAGTAG GAGAAAAGCC TTATTGGAAA GATCCAAATA ATGACTTCAG AAAAAACTTG AAAGTAACAG 000320 000321 CAGTGCCTAC ACTACTTAAG TATGGAACAC CTCAAAAACT GGTAGAATCT GAGTGTCTTC AGGCCAACCT GGTGGAAATG 000400 000401 TTGTTCTCTG AAGATTAAGA TTTTAGGATG GCAATCATGT CTTGATGTCC TGATTTGTTC TAGTATCAAT AAACTGTATA 000480 000481 CTTGCTTTGA ATTCATGTTA GCAATAAATG ATGTTAAA |
Predicted Small Protein
Name | NONHSAT145272_smProtein_116:217 |
Length | 34 |
Molecular weight | 3803.4286 |
Aromaticity | 0.0606060606061 |
Instability index | 46.4545454545 |
Isoelectric point | 8.25335693359 |
Runs | 5 |
Runs residual | 0.0326086956522 |
Runs probability | 0.0296767355591 |
Amino acid sequence | MILESSSLKLLTPPVPLVSYRIRELLNQSYERG |
Secondary structure | LEEELLLLLLLLLLLLLHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |