NONHSAT145635
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145635 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1676 nt |
Genomic location |
chr17+:10633092..10672360 |
Exon number |
5 |
Exons |
10633092..10633193,10656111..10656193,10657546..10657679,10669996..10670173,10671182..10672360 |
Genome context |
|
Sequence |
000001 CTGACCTGCA CCAAGGCCGC CAGCGCGAAG AAGGCGGCCA TGAGTCCGTT GCAGGCCCGC CACAGCGCTG GCGCCATGGC 000080
000081 TCGGAGAACA CGGCGCGGGG CGAAAATATG CTCTCTTAAG AACCAAGTCT GAAGCGAAGG CTGTACTTGA ACTTCGGGCT 000160 000161 GGCTGGACCA CTCAGACCGA TTGAGGCCCC TAAGGTAAAA GCCTTGCTCC AAGTCCCCTT CTGACTTCTA GTCACTTCCG 000240 000241 Tgctgccagc agagggcgtg ggattcttcc tgaggagcct gagtctcagc tttgccaggt ccttgctgtg tgaccttggG 000320 000321 CACCTGTGCT CCCTTGACAA AGAGGAATAA AACCTCTTCA GACTACTCTC CTATCGATTC TCTCCTGGAA CATATGACCA 000400 000401 CCATCAATTA TAggcaagaa catgaacacg ggagtcccaa agacttgggt tcaaatgtca gccccttcac tcgctggctg 000480 000481 taggtgtgag gccctggCTC CTGTGGGGCT ATTGCAGAGG AGAAACTTCT GGAACAGAGA GCTCCTTGTC CAGGGATGCT 000560 000561 GCATCTGGGT GAGCTGCTCC TTGGATATGG TGCAAGTGTG GCCAGGGTGT GGTGTGGAAG GAGCAGAAGT CTTCAGGACt 000640 000641 gaatctggat ggaccactgt gacagctgta tacccaggtg gtaccagttt ccctctctgc agaagtcccc ccaacagcac 000720 000721 cattctcagt gccatacctg gcctcatcag ggctctgatg caagacactg tatatgcaga atatattatt tcatcctcac 000800 000801 aacagttctg tatcttccac attttatagg ctaaggaaat aggctcaggg tagtcaagta gctttcccaa aggcacacag 000880 000881 cagcagaagg ggatttgaac ccaatttggg ctatctccaa accccacact ttCGGAATAA CTGTGGAGGT ATCAGGATGC 000960 000961 ATCTATTATA TGTCAGGGGA CTGCTAGAGA CTCAAAGCCC TCCCCTCCTG TCCATAGGAA AGGAGAGACC CCTTAGTACT 001040 001041 GATTGCTTTG GTGGGGCTCT GGCACTCCGC AGTGATCACC TATAGGAAAA CATGGAGTAT CAGAATATTG GTCTCTCAGG 001120 001121 AACCTGGCTT TGTGGGGTGG TTTGAGGCAG TAGTTGCCCC TTCATATGTG CACCCAGGCC CCTGCCAGAC AGGTAATCAC 001200 001201 ATTGCCTCCT CCTtgtggca gattatattt cccagaaagt gcctgcaaca atacttccag tcccatatgt gcttctagag 001280 001281 ccggtcactc tctcagttta aaggtggagt ctatttccct tccccttaag actgcctcag tggttagact atggcaagaa 001360 001361 agatatcatg tgacttccaa gacaaatcct aaaaggcaac acagcttcca cctggctctt tctattttga gccacttacc 001440 001441 tatggaacac cagccaccat gttggaagga agcccaggtg acatggagaa gcatctgtga gtgctctggc aggcacgcca 001520 001521 gcttgaatct cagccatcag ccagcatcaa ccaccagatg cgtgagagag agccttcaca tgacttcagg cctcagcctg 001600 001601 caagctgtcc cagcttatgc tgagtgagca cagacaacct atccctgctg agccctgtcc agtctgcaga tttctg |
Predicted Small Protein
Name | NONHSAT145635_smProtein_956:1084 |
Length | 43 |
Molecular weight | 4606.3294 |
Aromaticity | 0.047619047619 |
Instability index | 63.6214285714 |
Isoelectric point | 6.69708251953 |
Runs | 6 |
Runs residual | 0.0333031946956 |
Runs probability | 0.0178119295766 |
Amino acid sequence | MHLLYVRGLLETQSPPLLSIGKERPLSTDCFGGALALRSDHL |
Secondary structure | LEEEEHHHHHHLLLLLLLLLLLLLLLLLLLLLLLEEEELLLL |
PRMN | - |
PiMo | - |