NONHSAT145898
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145898 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
828 nt |
Genomic location |
chr17+:16120560..16121473 |
Exon number |
2 |
Exons |
16120560..16120775,16120862..16121473 |
Genome context |
|
Sequence |
000001 TGTGTGTGGC GTTGGCGGTC TTGGCATGGG GCTTCCTCTG GGTTTGGGAC TCCTCAGAAC GAATGAAGAG TCGGGAGCAG 000080
000081 GGAGGACGGC TGGGAGCCGA AAGCCGGACC CTGCTGGTCA TAGCGCACCC TGACGATGAA GCCATGTTTT TTGCTCCCAC 000160 000161 AGTGCTAGGC TTGGCCCGCC TAAGGCACTG GGTGTACCTG CTTTGCTTCT CTGCAGTTTT CCGTAGGGAG CTAAGTGAAT 000240 000241 ACACCGAAGG TCTTACCTCT GAACCCCTCA CAGCCTAGGG ACAGGAGCGG CCGGCTTACC TGGTGGGTTG GGGGACGTCG 000320 000321 GCAGCTCGCG TACTACGCCA GCAGGATTGA GGAGCAGAGA AACAGTTGCA GTTGGTTGTA TTCAGTACCT GCATTTCCGT 000400 000401 TGGGAACTCC ACCTGTACTT GTTATTCTGT GGAACTTTTT TTTATTTGTA GAAGGAGCAA GAATATTGAC CTTACTATAT 000480 000481 AGCACACGAA ACAATCTATG CTGTATCGTG CCTGCTCAAT CCTTAAAGTT AACTTCTAAT GATAGTAAAA GACCTTCCTG 000560 000561 CTGCCTTTAA AATGCAGCTT GTGCTAGTAA CATGCATGTG TCAAATTGAA GAATTAGACA TAGATGACTA GATAGAAAGT 000640 000641 AATTTTGTAG GTAATTTTAG AGTTCAACTC CACCCAGCTT TCAGTGAAGG AACCTTTCAA ATAATAGATT TTTGCTTACC 000720 000721 ATAGAGAAAA GATCAAATGA CAAAGCAAAT ATTGACCATT AAGCTGGAAT Atggtgataa ttgaacagtt gtataaatga 000800 000801 agtaattgaa ttgtacacat acaatggg |
Predicted Small Protein
Name | NONHSAT145898_smProtein_62:277 |
Length | 72 |
Molecular weight | 8012.1231 |
Aromaticity | 0.0985915492958 |
Instability index | 41.785915493 |
Isoelectric point | 6.05657958984 |
Runs | 8 |
Runs residual | 0.0358784284655 |
Runs probability | 0.0405847023494 |
Amino acid sequence | MKSREQGGRLGAESRTLLVIAHPDDEAMFFAPTVLGLARLRHWVYLLCFSAVFRRELSEY TEGLTSEPLTA |
Secondary structure | LLLLLLLLLLLLLEEEEEEEELLLLHHHEELHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLL LLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooo ooooooooooo |