NONHSAT145918
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT145918 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
545 nt |
Genomic location |
chr17+:16342301..16344525 |
Exon number |
5 |
Exons |
16342301..16342374,16342641..16342728,16342842..16343017,16343499..16343567,16344388..16344525 |
Genome context |
|
Sequence |
000001 GGATTGGGAT ATTCCGACTC CTTAAGGGCC TGGCGCACAT AAGGTGTGAC CTTTTCATTC CCGTTGTTAT GGAGGGCCAC 000080
000081 ATCTGCCAGA GCCTGGAGTC TGCGAAGGCC GGGACCCGGT TCCCCGGCCC ACAGTGGGGG TGTGCAAACC CGAGAGAACT 000160 000161 GGGAAGTGCC GTCAGAAGCG ATAACTGACG ACGTCTAATG TCTATCTGAC CGCAGTCGCT GAAACCTCTA CAACTTAGTT 000240 000241 GACCGTAACT GCCAGAGCCC TGCCCTGAAT TCCTGTCCTT ACTCCCTCTT TAAGATTGCG TACCCACTGC AGAGTGCTGA 000320 000321 AGACGGGGTA GCCACGAGGT TGCAAATTCG TGAAGAATCA GCATCATGTT TGGCAGCTGA GTATTGGAGC CAGGAGCCTG 000400 000401 CCATGAGGTT TTGAGAACAG AGTGCTGTTT TAGAGCTGGC AGCAGCATCT CAGCCCAAGA GAAGGTAAGC CTTGAGCTGG 000480 000481 CCAATGATCC CTTCAACCCC ATAGTGGAAT GAATAAACAG CTGATCTTGT TAAAACTCGC TTCAA |
Predicted Small Protein
Name | NONHSAT145918_smProtein_68:187 |
Length | 40 |
Molecular weight | 4158.5731 |
Aromaticity | 0.0512820512821 |
Instability index | 48.9179487179 |
Isoelectric point | 6.51776123047 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.0 |
Amino acid sequence | MEGHICQSLESAKAGTRFPGPQWGCANPRELGSAVRSDN |
Secondary structure | LLLEEELLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |