NONHSAT146100
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT146100 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1570 nt |
Genomic location |
chr17+:17585043..17588364 |
Exon number |
2 |
Exons |
17585043..17585107,17586860..17588364 |
Genome context |
|
Sequence |
000001 CAGGCCTCCG GGCCGCGAAG TCGCAGCGCC AGACCCAAGG CCCCCGAGTG AGCGCGGGCG CCGAGGCAAG CCGGTATATT 000080
000081 CGGGGCCCAG GAGCAAGGAA AAGTGGCCTT TTGCGTGACA CAGAAGTGGA CACATCATTC TGATCTCAGG GCAGGCTCAG 000160 000161 CCCCATAACT CTGGCAAAAG CTCTCACAAG CAAAAGCCTT GGAGAGGAGG AGAATGTATC AAGGTGAGAT CCAGGCCCCA 000240 000241 GAAGCCAACT GTGGAGTGGG CAAAATAGGA CCTTTCCCAC CAGCCTAGCA TCCCTCTGGC TTCTGTGGAG ATAAAGGGAA 000320 000321 CTCAGGGGTA CTGGAGCtgc ctttctcttc cactagactg tggggctctc ataggcaggg accctgtctt actcCtcttt 000400 000401 gttttatttt tgagacaggg tcttgctgtg tggcccaggc tggagtgcct tggcacaaac acagctcact tcagcctcaa 000480 000481 cctccagggc tcaagcgatc ctccagcatc agtctcctga gtagctggga tcacaggcgc ccgacaccac acgtagctaa 000560 000561 ttttaaattt tttttttttt ctagagacag gggtcttgcc atggctggtc ttgaagtcct gggctcaagc gatcctccct 000640 000641 ctttggcctc ccaaagtgct gggattacag gagtgagtca ctgcacccag ccTTACTCCT CTTTAGACTC CCAAGCCTAG 000720 000721 ACcaattgct ttcaaattct tgcccgtgac ctatagtaag aaatacatcg taggtaacta cacaggtcac actgtatata 000800 000801 gctgaaacaa aagtttactg aaataactcc cttactgtgt ctgctggtct gtaatccttt ttgttcttgt gtatttgttt 000880 000881 tttttttaat tactgattgc tacccacgaa attaattttg caatccactg atgggtcata cccagaattt gaaaaaaacA 000960 000961 AGCCTAGGAA ATGAATTTGC CATCTATTCA TGCAACAAAT GTTAATTGCA ACCCTAATAA TTCCTCTCAT GTTAAACTAC 001040 001041 TCAAGTAACA CTTGGATACT TGGGTGAAAA ATGCAAATAA GCCAGAAATA TATGTAGTAA AAGTAAAAGT TCCCTTGGCA 001120 001121 CCCTCCCTGC AGGTAACCCC AGTTAATAGT TTGAACGTAT CCTTCCAGAC TTTTTGTTAC TCACTTAATG Catatatata 001200 001201 tatatatata tatatatata tatatatgta tgtatgtatg tatattacat ataCCAATCC ATGCATAGTT TTCTTTTTCC 001280 001281 CCAAGTGAGG ACATACTGTG GGCTCTTCCT CGGCAGCTTC CTTTTTCCTC TCCGTTTGTC TTGGAGAGGT TGGTTGTGTG 001360 001361 GCGAAGTCCT TCAGGGCAAG TTctgggttg actcctggct ccaccacata ctgaacaggc catttacctc tctgtgcctc 001440 001441 agtgtcccca tctttacaat caggagaata acagtacaga cctcacggta ctgaagtaaa gatgcagtga gttaatccat 001520 001521 atgaagttta gagcagtgct tttgccaata aatgctgatt gctgccgtca |
Predicted Small Protein
Name | NONHSAT146100_smProtein_1187:1267 |
Length | 27 |
Molecular weight | 3276.0503 |
Aromaticity | 0.230769230769 |
Instability index | 98.1384615385 |
Isoelectric point | 6.79400634766 |
Runs | 4 |
Runs residual | 0.0554561717352 |
Runs probability | 0.0265412471295 |
Amino acid sequence | MHIYIYIYIYIYICMYVCILHIPIHA |
Secondary structure | LEEEEHHHHHHHHHHHHHHHLLLLLL |
PRMN | LLHHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | i????????????????????????? |