PAPPA-AS1

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Annotated Information

Approved Symbol

PAPPA-AS1

Approved Name

PAPPA antisense RNA 1

Previous Symbols

PAPPAS

Synonyms

PAPPA-AS, DIPAS, TAF4B, TAF2C2, TAFII105, NCRNA00156

Chromosome

9q33.2

RefSeq ID

XR_041634

OMIM ID

610689

Ensembl ID

ENSG00000256040

pubmed IDs

15656990

Sequence

>gi|239749650|ref|XR_041634.2| PREDICTED: Homo sapiens PAPPA antisense RNA (non-protein coding) (PAPPAS), miscRNA

000001 TGAAGCGTAC AAGCTATTAT ATATTTTCAT AATATAGAAC TTTAAAGTAT AGTAATCAAC AGTGGCAAAA TATTTCTGTC 000080
000081 TCTGACATTA TTATTTGTGA GATCCAACCT GTAATTGAGA TCAGAGAAAA CAGTATGGGA AAACAAATCC ATGAGAACAG 000160
000161 GATAAAAATA TCATGAACAG CAAAATATGT CTGAGTATTT AAAACTGTAT AGAAAAAATA AATTAGATGA ACAATTGTGT 000240
000241 AAATATAAAT TAAAAAAGAT GACATTCTTA ATAAATAAAG TTTACTATTT ACATTTTTAT ATATTGCCAA AAGATTTAAC 000320
000321 TTAGATCCAT AAAAACACAT AAACAGAAAA AAAAATAGGA GCAGCAAATT TATGCGCGTG AGGTACAGAA AAAGGATTGG 000400
000401 AATTGTGTTT AGTTTTTGGT GTTTAGATTA TTTTCTTTGT GTCTTTCTTC TTTTTCTTTT TTTTTTTCTT TTTTACAATA 000480
000481 GGCCAGAAGA ATTCTTATGA GAACAGCTTT TAAGCACTTC AATGGAGTGT CATTTTTTTG GTAGCTTCCA GAAGGTGCCA 000560
000561 AACAGGTTTC AACATCATAT TAATTAGAAA TACCCATAAT AATTATAACA ATAATAAAAA GGTATAATAT GGTACATAAA 000640
000641 TATGGAAGAG CAGTTTGTAA TATGAATACA TTTTCTCTAG ACGAGATCAC AGTTTTATTT TGTAAATATT ACATTTAAGT 000720
000721 ATATATATAC ACACATATAT GTACAACTAT ATATACATGT GCATATATAT GTAAATTTAT ATTTATATAT AATATCTTTA 000800
000801 TATAGATAGA TATCTGCAGA CAGGTTATTG ATTATAGAGA CCCAAGAAAG CAACTCAATA ATTGTTCAAA GTTTTCCTCA 000880
000881 CTGACTGCTG GTGTGTAGTT TAAGAAGCCC CCATTTGTTT GCACTCAGAA TGCCTTATCT TCTTTTAATG GAACACTTGA 000960
000961 TGTGGAATTT TAAGTCTGAG AAGTGAGGTG CCTTCTGAAG AAGAGATTTT AGAGACTCCC TTCCTCTATA AGTTGGAAAT 001040
001041 GACCAGAAGT CTTAAGTAGA CGACAGTTAG CTGACTTTGA CATTGTAGGA CATAATCAGC TTTTAACCAA ATTATAGAAC 001120
001121 TGGTAAAGGG TAAGATCAAA TTTGCCAAAA AAATAAAATA TTCTCCAATA CAGGTCTCTC TTTTAAGGTG GACTACAATT 001200
001201 CAGGAGCTCC GGCTTTATTC CTTGAAATAT CAAACAAGCA CTCCCTGTCT TGTCTTTCTA AAAGGCCGAT GGGCCTGTGC 001280
001281 ATTCTTGAAT AATAACCCAT GGACTTTGTG TCAAGCGTTG GCCCTCACAG CCCACCTAAA ACCTCAGGGC CTCAAAATCT 001360
001361 CCTGCCCTCC CACTGTGAGG TAGGTATATA GTATTATCCC CATTTTGCAG CTAGAGAAAC TGATGCAAAT GTAGAGGCAA 001440
001441 TTGGATAACT TGTTCAAGAT CACTGAGCAA ACTGCTGCCT GGAGTCAAAA ATTCTAACTT CTGTACAACA GGGACATAAT 001520
001521 TTCTCTTTTG GCTATTATAC ATTTCTTTTA AAAAGCAAGT GATTGGTAGG AATTTGGCAA AAGTTGAATA AGTTACAAGA 001600
001601 ACAGGCTTTT ATTCATTTGC TATTTGGTTT TTATGTTTCT TGTTTACTTC GTTTGATTTG TTTCTCAAAA CTCACTCAGT 001680
001681 GGGATTACCT GTCTGTCATG TAGCAGCTTT TTAAAAAACT GGACTGTGCA GTGTGGTTCT GAGTGCAGTC TTTATAAAGC 001760
001761 CCAGTGCTGT ACTGGTAAAT ATAAACATTT TATAACGTGA AAAGCACAAC GACACAATAT GTCCCCTTAA TAGCTGGAAA 001840
001841 AACCAATATA AGCCCTCCCA CTCCCTACTA CCACTGATTG CCACCAAACA AATAAACAAA ATGCCCACCC CACCCAACAA 001920
001921 CAACAATAAC ACATCAAGGG GGAAAATGTC ATATTTCCTG GACCTACCAC AATGTACAGA AAATAACAGA CAGTGTTATC 002000
002001 AAATCCCACT CTATGTCTTC TAGGGAAATC TTTATGTTTG TGTCTACCTA CTGAGTCTGT AGAATAAACA ATTTCCTTTA 002080
002081 GGAAACATAA AAATAGGTTT TTTATTCTTA GTTTTTAATC ATGCATTTTT ATTTCCTTTT AATCTCTTTG TCTTCTATTA 002160
002161 TCTCTATCTG TACAGCTTTG TCACCATTTT TTTTTATTTT CTCACTTGAA GTAGTTCCAG AAAAAAACAC AAAACCTCAA 002240
002241 AACTGTTAAC TTGACCTTAT AATTTCCTTT CTCTTTCTTT CTTTCTTTCT TTTTCTTTCT TTCACACAGG TAAGACCTAT 002320
002321 AACAACAAAT TGACAATTAC AACCAAGTTA AATCGAACCT GGAAGGGAGG TAGCTGAAAT CTGTCTCAAA GAATTATTTT 002400
002401 CAACAAATAG TATTTAAGCA TTGGCCAGGA TGGGAATAAG ACCAAGAGAA CCGTCTAGGC AGTGACTCAA TGTGTTGAAG 002480
002481 CCAGGAGTGG CAGCTGATAC CCTGCATTTT CAAAGCCCTA CCATCTATGA CAATCTTTCC CTTCCTTAAC ACCCCAATTC 002560
002561 ACCATCAAAA CTCATTTCCC AAGGACTGTA TTTCCTTAAA AGGTTGTTGG CACAGAATCT GGGGGTAATG CAAATCCTTT 002640
002641 GGGTAGGTAG TTAAGATTGT GGCTTGGAAA AGCTTCCCTA AATAGGGCTT AGAGGACTGT CCACCTCATC TTTCATATTT 002720
002721 TGCTGCTAAC AATCTAATAC TTCAGATGCA GAACCTTCAG TGTTTTAGGG CCTTTGAGCT GCTGACACAC AATAGTGCAT 002800
002801 CAGAGCTGCC TCTCAGTGCT CCGGTCACCT ACACAGAAGA TGACTGAAGG AATGAAATGA CGAGTTAATT CCCAGGAAGA 002880
002881 AAATGAAACT GGGAACAAAT GCATTGCCCA AATTGAGCTG ACCCTCCTCC ACTAAGGTTT GAAAAGACCC TATTAAAGAT 002960
002961 ACCTTCCATG TGGGCACGAG GTTGGCCACC AATCAAGTAG CCTCTTTTGC CTAATATCCT TGGCAAATAT AAATTTGTTA 003040
003041 GCAACAGGTC TGAATGAAAG AGACTGGGTG GGTCTTGATT CAGAAGAGCT GAATTCACTC TGTGAGTCTG AAGATACAAG 003120
003121 TCAGCCTCCA GGAATCTTTG CTTAGCTGGA TAGTGTGAAA ATAGATGATG ATGGGAGTGA AGATAGAAAG AGGATAAGGA 003200
003201 CTGATTTGAG GGAAGCTGGT AAGGTTCTTC TGTGGCTCCT GAAATCACAT CATTAGTAAT GTCATCTTTG GGTCTTCAGA 003280
003281 GCTTTTTGTA TTACCTATGG GTATAATTAA GCAACTGGGA GGGTTGATAC TGTTACATTT CTTAGCTTGT ACCTTCTAAG 003360
003361 GTAGTTAACA CCACACAGGC TGATAACTCA GGGCAAGAGA GAGGCCTGGA GAGTTGACAA GAGTGTGAAG ATACTGGAGA 003440
003441 GGGGTTCAAA ATAGGATCAA TTCTTCTAAT ACTATTCTTA TTTCTTGCTA ATAATTTGTC CTTGTAATTA TAGTGAAGTA 003520
003521 ATGGTCTGGA TATAAATGAG ATATGGTTTT GTGAGGAAGA AACATAGAGG ATTATTCTTA ACAACTGTGG CAGCCTTGCC 003600
003601 AATATGGAAC CCAATTTCAG AGTTTGTGAA ATGGTACAAG TCTCATAAAC TATCTCAGCA CTGCATCCGT ATTTGTGGGC 003680
003681 ACCTGTGCCA AAAGCACCTT GATATGTTTC TTAGTGTAAT TGGCCAGAGA TGGCCAATAG ATGTCTTCTC AAGTGTTTTT 003760
003761 GATCACCAGG TCAGTGCTAT TGGGAGTGAT ATAATATGGT GGTTCCTAAA GTTATTTTTG GTCTCTTTTT TTTTTTTTTT 003840
003841 TTTAAGTGCT ATGATAGATT AACAACACCT GCCTTGGATG CAGGAATTAG GTGGGGCTGC ACACGTGCAT GGTATTTTCT 003920
003921 ATCCCTATGC TAGGTTTTGT TTCTGTTGGC TGTCTTCACT AGACTTGAGA TGACTTGATT TACAGTAATC CCTATGTGAT 004000
004001 GTAACTAGTC TAGACCTTCC CTTCTCCGCA ATTCCCAGCT CCAGGTTTCA GAAAGTATGC CACACTCAAC CCTTCTCTCC 004080
004081 AGTTCATCCT GTATTAATTT CTTCCCATAT TAATTCAAAG GGAGTGGACA GGTCCCTGGC TGAAAAGAAA TAAAGAGATC 004160
004161 CCCAAAGTGG TGGGGGCTTC CACGTGCAGT TGACTAATTT TCACTTAACT TTTGGAGGCT AGACATGGGA GAGAGAAAAG 004240
004241 CACTGCCCAG TCACAGGTAT GGAAGGGAGT ACTGCTAGCT GGAAAAACCA TATAGAAAAC ATGATGACCA TGTTGAGTTG 004320
004321 TTGGTGCTGA GGCTGTGAAC TCTTTGGCTT CCTTCTGATG GCCCTCTTGA GAACAATCTG TACTGTTCTT ATAAAAGATT 004400
004401 CTTTCTCCCA GAATTATATC TCCTCAGAGC AACAGCAAGG TTCTCAGGAT CGAAGCCTAC TCTAGCCTGA AGGGCTAGGA 004480
004481 AGATTAGGAT AAGGATAAGG ATAATAATCC AAAAGTCTCG ACAATTCCAG TAGTCTCTGG ATGGCTCCAA CATCATAGAA 004560
004561 ATTTAACACT GTTCCACTTG TTTACAAAAT CTAACACTGG CTTAGACATT CTGGACTTTC AGTGAGGGTT CCAGCATCTG 004640
004641 ATGTCCCTCA ACTCCTTTCC AGGGTGAGAG GCCCACTTAC AGGAAACTTA ACTTCTCACC ATGTGGACCC ATGAGGGTTT 004720
004721 TTCTCTTGCA GAAGGGCTAA AAAGTGAGGA GCTATGGAAA AATGTGGGTC ACTTTTAAGG CAGACTGTTT GGTTGTGTGG 004800
004801 AATTTTTCCT AACCTAGTTC TACCATCTTG GATTATTCAA TGTATAGGAT AGAGCAGCAG GAAAAGTAGC AGCAAATGTG 004880
004881 GTCCCAAGGC AAGATCTGGG GGAACAGGTA AGTCCTAGAG GGATATTATG ACCTCAAGCC TCAAGCAAGG GGCTGATATA 004960
004961 ATACCTTGAC ATTGCAATCC TAAGCCATTC TCAGATTGGC CTCGAACCCT GGAGTTGGGG TAAAATCCCC CATGGCAGCA 005040
005041 GAAGAATTGG GGCGCTTTGC ATACCTGATA ATCTTTACCT CTTCCTAGGT CCTAGTTCCC TAGAAGGTAG GGGATCACAG 005120
005121 ACTGTTTCAC TTCCAATCCC AAAGGACTGC ACAATTGTGC ATGTCCTACA TATTCTGAGC CTCAGAGTGT GAACTAGCTT 005200
005201 GACATCTCCA CACTTGGTCT TAGCAGTTTC TGCAAATTTC TTTCTCCCAA GGATAGTGTT GGCTAGGAGC TTGGGAAAGA 005280
005281 AAAGATTGAG TTTATTCCGG TCTCTCTCTG CTCATCTCCA GAACTGCCCT CACACAGATG TTTGTATGGG TGTGTATGCA 005360
005361 TGCATGTGTA CTAAACACAG ATGGGCACAC TCTAGATATA GAACACGTTT CTTGCTGTGG TTGTGTGACA AATGGCTAGA 005440
005441 ATTTTAGGAG GCTCTGGGAC TGCACACTGT ATATGCAATC CATCTCAGAC TTTGGGATGG GAATCCATTT CATCATCCAG 005520
005521 CATGGCGAAA CTTGGTTCAT TCGCCCCAAT GTGAGTCCTT CCTGGGTAAA ATTAAAGGCA GACCGGTTGG GTGCTAAGGA 005600
005601 TCCCTGGTGT GGAGAGGCCA TTCCGTTGAG CAGCTGACTG TGAAATCAAT ACCAAAGGGA TGTGGGTCCT GGCGTTGGGA 005680
005681 ATTCTTTGAC AACTTCTTGT CCTTCCTTAG CCATGGCTGT ATCCCCGGAG GTCTTTCCGG CTGTGTTCTT GGGCCTGGGG 005760
005761 GTCCCGACAA GCACAGTCAC CTTGTAGATC ACAGGACATA GGGAATGGGG TGACCT

Predicted Small Protein

Name PAPPA-AS1_smProtein_2120:2248
Length 42
Molecular weight 4826.6925
Aromaticity 0.166666666667
Instability index 64.8954761905
Isoelectric point 6.50360107422
Runs 6
Runs residual 0.0333031946956
Runs probability 0.0483277395042
Amino acid sequence MHFYFLLISLSSIISICTALSPFFFIFSLEVVPEKNTKPQNC
Secondary structure LEEEEHHHHHHHHHHHHHHLLLLEEEEEEEEELLLLLLLLLL
PRMN LLLLHHHHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL
PiMo ooooTTTTTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiii