Difference between revisions of "ENST00000313495.2"
Line 42: | Line 42: | ||
sequence = <dnaseq>ATAGTTCTCTTTAGTTTTCCCATGATTTATCACAAGCAAGTTCACAGCAGGTTAAAATAATTGAATGCGGTGATAGCATACATACTGGCATGATTTTATGAGCCGTCATTCATAACATATTTGTCCCAAAGCATAATTTCCATGATAGAACTCTGATTCACATGTAATTTTTTTGCAGCGACGACACAGTTGAAATAACTCCTTCGTGGAGGCTGGCTACATTTTCACAACGTCTGGTCCCAAGCTAGATCTTCGGGAAAAGGGATCAAGGAAATGACTATTCCTCCAAATAAAATGCAACAAGAAGAATGAAAAAACGTAGAAGAGAAAGCCTCGTGAAACTGAGAAGCATCTGCAACCACAAACTACAAAATGTAGCTGCTAAACAAAATGAAAGTTGGATCAAAGTGGTGGCAAATATCAAGAGTGAATATACTCCACGGCAGAGTACTGCAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACAAGCTTCCACCATGAAGGGTTGTCATTTGCCATAGCAGGGAGAGGAAAATGGAGCAAATCAGTCACCAGCTCGTCATACAGAAGAGTGTCCCACGTCATATCTGCTGATATGTTATGGCCAAAGTACATGACTATCTCCAAGGAGCTGAGAGGTGAAATTCGGACATTTGTCTGGACGGAGTAGAACCAAGAGAGTCGTAAACATCCTGTGGACTACACACCGTTTAACAAGATGCAACAGTATTCTGGCTTTGCCTTTCCTGGAGCCCTTAAACAGGCTGAAGTGAAAAGCACCATGACCTGTCACTACAAGACGAGAAGCCTCAGGAGAAGGAAGGAGATCCCTTTTCATTGGTTTTGCCGAGTTTCCCGAGCTCCATCCTCCTACAGTTAAATCAACACTCTTTATCCTTAGACTGCTGATAATCTCACCAACCGCTTCCTGGTAAGATCTGTAATGCGTGAGGTCTTCCTTCTTAGTTGTTTGCAAACATCAGTGATTAGGGACAATTAGGGACTGGTGTGCCTGTCATTCTTCTCCTTTCAGCTGAGGAGGAAATCCTCATGCACCGTTATCGGGAGTGAGACTTCATCTGTCAGCTGCAGTCTCAGGAATCCACGGGTTCATTCAGTCGCAACTCTAATCTCACTAACTTTATCTGTGTTCCTCAAATGCCTTAGACTATTTGCTTCCCACTGATAGGGAAACCTGACATCTCATTTTCTCAGTGTCCAGACAAAGATTCGTACATAGCAAGAAACTAAGATAGGTGTTACAGAACATGGAGGGAACCAGGAAAACCAAATAGAGGACCCCCTTCATGGGGCTTCCAACACGACAATAGGCAAAAGAGAAGAAACATACATGTAAGAGACAAGCAAAACCCAGAACCATCACTTATGAAGGATGTCCTCATCACCCTCTTTTGCTGCCTGTCAAAACCGGTGAGGGCTCATATGACACCTTAATTATGAATTAATCTTCGTTCCTCCTACACCAGCACTTCCCCTCACCCCAGTCGAAGCCATCTCTTTATATTTCCATAGCTTAAAATGCTATTTTTGGTTCTAGATGCTTTGCCTCTAGATTTGGATACTGCATCCATATTGTTGTATATTTTTTCCTTTCTATCTTTTCCACAATGTTTTTTTTTTTTAACTTTTAAGTTTAGGGGTCCAAGTGCAGGTTTGTTACATAGGTAAACTTGTGTCATGGGGGCTTGTTGTACAGATTATTTCATCACCAAGATATTAAGCCTAGTACCCATTAGTTACGTCTTTCTTCTCCCACCCTCCACCTTCCAAAAGGCCCCAGTATGTGTTGTACCTCTCTATGTGTCCATGTGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACGTGCGGTATCTGGCTTTCTGTCCCTACGTTAGTTTGCTAAGGATGATGGGCTCCAGCTTCATCCATGTCCCTGCAAAGGACATGGTCTTGTCCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTACCAATTTTGCTTTATTCAGTCTACCATCGATGGGCATTTAGGTTGATTCAATGTCTTTGCTATTGTGAATAGTGCTGCAATGAACATACACGTGCAGGTGTCTTTATCATAGAATTATTTATATTCCTTTGGGTATATATCCAGTAATGGGATTGCTGGGTTGAATGGTAGTTCTGTCTGTAGGTATTTGAAGGATCACCACACTGTCTTCCGCAGTGGCTGAACTAATTTACACTCCCACCGGCAGGGTCAAAGCATTTCTTTTTCTCCACAACCTCGCCAGTGCCTGTTGTTTTTTGACTTTTTAATAATAGCCATTCTGACTGGCGTTAGATGGTATCTTGTGGTTTTGATTTGCATTTCTCTAATGACCAGTGATGTTGAGCTTTTTCTCATGTGATTTTCAGCCACATACATGTCTTCCTTTGAAAAGTGTTCATGTCCTTTGCCCACTTCTTTATGTGGTTGTTTGTTTTTTTCTTGTAAATTTATTTAAGTTCATTATAGATGCTGGATGTTAGACCTTTGTCAGATGCATAGTTTGCAAAAATTTTCTCCCATTCTGTAGGTTGTCTGTTTACTCTGTTGATAGTTTCTTTTGCTATTCCACAATGTTTTGTGCAAGATAAGTGCTTAGCAAATGCTTGTAAAGGAATGCCTGCACCAGGAAAGTCCAATAGCTATGAATAAAGAAAGAAAGGACAAGTTCCAGGGGAGGTGATTTTTTTTTCATTTTCATTTTTTTAGACAGCTTTTAAAGGAATGGAGTAGCATGTTCTTCTGGAGCAGGAGTTACAAATTGGACCTCTAAGGGCCACATTCAGCCTATCCACATGGTTGCAGCACTGACAGAGTGTTTTGAAATTTTAAACTCTGAATACTTGTAGATAACATATGCATGCCACAATAAACTGCATTTCCATC</dnaseq>| | sequence = <dnaseq>ATAGTTCTCTTTAGTTTTCCCATGATTTATCACAAGCAAGTTCACAGCAGGTTAAAATAATTGAATGCGGTGATAGCATACATACTGGCATGATTTTATGAGCCGTCATTCATAACATATTTGTCCCAAAGCATAATTTCCATGATAGAACTCTGATTCACATGTAATTTTTTTGCAGCGACGACACAGTTGAAATAACTCCTTCGTGGAGGCTGGCTACATTTTCACAACGTCTGGTCCCAAGCTAGATCTTCGGGAAAAGGGATCAAGGAAATGACTATTCCTCCAAATAAAATGCAACAAGAAGAATGAAAAAACGTAGAAGAGAAAGCCTCGTGAAACTGAGAAGCATCTGCAACCACAAACTACAAAATGTAGCTGCTAAACAAAATGAAAGTTGGATCAAAGTGGTGGCAAATATCAAGAGTGAATATACTCCACGGCAGAGTACTGCAAATGCTGCACATCTTTCATGGATTCTGGTCCACCTCGTCCTCACGCGGGGATGCAGACTGACAAGCTTCCACCATGAAGGGTTGTCATTTGCCATAGCAGGGAGAGGAAAATGGAGCAAATCAGTCACCAGCTCGTCATACAGAAGAGTGTCCCACGTCATATCTGCTGATATGTTATGGCCAAAGTACATGACTATCTCCAAGGAGCTGAGAGGTGAAATTCGGACATTTGTCTGGACGGAGTAGAACCAAGAGAGTCGTAAACATCCTGTGGACTACACACCGTTTAACAAGATGCAACAGTATTCTGGCTTTGCCTTTCCTGGAGCCCTTAAACAGGCTGAAGTGAAAAGCACCATGACCTGTCACTACAAGACGAGAAGCCTCAGGAGAAGGAAGGAGATCCCTTTTCATTGGTTTTGCCGAGTTTCCCGAGCTCCATCCTCCTACAGTTAAATCAACACTCTTTATCCTTAGACTGCTGATAATCTCACCAACCGCTTCCTGGTAAGATCTGTAATGCGTGAGGTCTTCCTTCTTAGTTGTTTGCAAACATCAGTGATTAGGGACAATTAGGGACTGGTGTGCCTGTCATTCTTCTCCTTTCAGCTGAGGAGGAAATCCTCATGCACCGTTATCGGGAGTGAGACTTCATCTGTCAGCTGCAGTCTCAGGAATCCACGGGTTCATTCAGTCGCAACTCTAATCTCACTAACTTTATCTGTGTTCCTCAAATGCCTTAGACTATTTGCTTCCCACTGATAGGGAAACCTGACATCTCATTTTCTCAGTGTCCAGACAAAGATTCGTACATAGCAAGAAACTAAGATAGGTGTTACAGAACATGGAGGGAACCAGGAAAACCAAATAGAGGACCCCCTTCATGGGGCTTCCAACACGACAATAGGCAAAAGAGAAGAAACATACATGTAAGAGACAAGCAAAACCCAGAACCATCACTTATGAAGGATGTCCTCATCACCCTCTTTTGCTGCCTGTCAAAACCGGTGAGGGCTCATATGACACCTTAATTATGAATTAATCTTCGTTCCTCCTACACCAGCACTTCCCCTCACCCCAGTCGAAGCCATCTCTTTATATTTCCATAGCTTAAAATGCTATTTTTGGTTCTAGATGCTTTGCCTCTAGATTTGGATACTGCATCCATATTGTTGTATATTTTTTCCTTTCTATCTTTTCCACAATGTTTTTTTTTTTTAACTTTTAAGTTTAGGGGTCCAAGTGCAGGTTTGTTACATAGGTAAACTTGTGTCATGGGGGCTTGTTGTACAGATTATTTCATCACCAAGATATTAAGCCTAGTACCCATTAGTTACGTCTTTCTTCTCCCACCCTCCACCTTCCAAAAGGCCCCAGTATGTGTTGTACCTCTCTATGTGTCCATGTGTTCTCATCATTTAGCTCCCACTTATAAGTGAGAACGTGCGGTATCTGGCTTTCTGTCCCTACGTTAGTTTGCTAAGGATGATGGGCTCCAGCTTCATCCATGTCCCTGCAAAGGACATGGTCTTGTCCTTTTTTATGGCTGCATAGTATTCCATGGTGTATATGTACCAATTTTGCTTTATTCAGTCTACCATCGATGGGCATTTAGGTTGATTCAATGTCTTTGCTATTGTGAATAGTGCTGCAATGAACATACACGTGCAGGTGTCTTTATCATAGAATTATTTATATTCCTTTGGGTATATATCCAGTAATGGGATTGCTGGGTTGAATGGTAGTTCTGTCTGTAGGTATTTGAAGGATCACCACACTGTCTTCCGCAGTGGCTGAACTAATTTACACTCCCACCGGCAGGGTCAAAGCATTTCTTTTTCTCCACAACCTCGCCAGTGCCTGTTGTTTTTTGACTTTTTAATAATAGCCATTCTGACTGGCGTTAGATGGTATCTTGTGGTTTTGATTTGCATTTCTCTAATGACCAGTGATGTTGAGCTTTTTCTCATGTGATTTTCAGCCACATACATGTCTTCCTTTGAAAAGTGTTCATGTCCTTTGCCCACTTCTTTATGTGGTTGTTTGTTTTTTTCTTGTAAATTTATTTAAGTTCATTATAGATGCTGGATGTTAGACCTTTGTCAGATGCATAGTTTGCAAAAATTTTCTCCCATTCTGTAGGTTGTCTGTTTACTCTGTTGATAGTTTCTTTTGCTATTCCACAATGTTTTGTGCAAGATAAGTGCTTAGCAAATGCTTGTAAAGGAATGCCTGCACCAGGAAAGTCCAATAGCTATGAATAAAGAAAGAAAGGACAAGTTCCAGGGGAGGTGATTTTTTTTTCATTTTCATTTTTTTAGACAGCTTTTAAAGGAATGGAGTAGCATGTTCTTCTGGAGCAGGAGTTACAAATTGGACCTCTAAGGGCCACATTCAGCCTATCCACATGGTTGCAGCACTGACAGAGTGTTTTGAAATTTTAAACTCTGAATACTTGTAGATAACATATGCATGCCACAATAAACTGCATTTCCATC</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:ENSG00000179136.2]][[Category:lnc-MYOCD-2]] | + | [[Category:Intergenic]][[Category:ENSG00000179136.2]][[Category:lnc-MYOCD-2]][[Category:Transcripts]] |
Revision as of 09:46, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000313495.2 |
Source |
Gencode19 |
Same with |
lnc-MYOCD-2:1 |
Classification |
intergenic |
Length |
2953 nt |
Genomic location |
chr17+:12453099..12540504 |
Exon number |
4 |
Exons |
12453099..12453394,12487877..12488038,12493758..12494065,12538318..12540504 |
Genome context |
|
Sequence |
000001 ATAGTTCTCT TTAGTTTTCC CATGATTTAT CACAAGCAAG TTCACAGCAG GTTAAAATAA TTGAATGCGG TGATAGCATA 000080 000081 CATACTGGCA TGATTTTATG AGCCGTCATT CATAACATAT TTGTCCCAAA GCATAATTTC CATGATAGAA CTCTGATTCA 000160 000161 CATGTAATTT TTTTGCAGCG ACGACACAGT TGAAATAACT CCTTCGTGGA GGCTGGCTAC ATTTTCACAA CGTCTGGTCC 000240 000241 CAAGCTAGAT CTTCGGGAAA AGGGATCAAG GAAATGACTA TTCCTCCAAA TAAAATGCAA CAAGAAGAAT GAAAAAACGT 000320 000321 AGAAGAGAAA GCCTCGTGAA ACTGAGAAGC ATCTGCAACC ACAAACTACA AAATGTAGCT GCTAAACAAA ATGAAAGTTG 000400 000401 GATCAAAGTG GTGGCAAATA TCAAGAGTGA ATATACTCCA CGGCAGAGTA CTGCAAATGC TGCACATCTT TCATGGATTC 000480 000481 TGGTCCACCT CGTCCTCACG CGGGGATGCA GACTGACAAG CTTCCACCAT GAAGGGTTGT CATTTGCCAT AGCAGGGAGA 000560 000561 GGAAAATGGA GCAAATCAGT CACCAGCTCG TCATACAGAA GAGTGTCCCA CGTCATATCT GCTGATATGT TATGGCCAAA 000640 000641 GTACATGACT ATCTCCAAGG AGCTGAGAGG TGAAATTCGG ACATTTGTCT GGACGGAGTA GAACCAAGAG AGTCGTAAAC 000720 000721 ATCCTGTGGA CTACACACCG TTTAACAAGA TGCAACAGTA TTCTGGCTTT GCCTTTCCTG GAGCCCTTAA ACAGGCTGAA 000800 000801 GTGAAAAGCA CCATGACCTG TCACTACAAG ACGAGAAGCC TCAGGAGAAG GAAGGAGATC CCTTTTCATT GGTTTTGCCG 000880 000881 AGTTTCCCGA GCTCCATCCT CCTACAGTTA AATCAACACT CTTTATCCTT AGACTGCTGA TAATCTCACC AACCGCTTCC 000960 000961 TGGTAAGATC TGTAATGCGT GAGGTCTTCC TTCTTAGTTG TTTGCAAACA TCAGTGATTA GGGACAATTA GGGACTGGTG 001040 001041 TGCCTGTCAT TCTTCTCCTT TCAGCTGAGG AGGAAATCCT CATGCACCGT TATCGGGAGT GAGACTTCAT CTGTCAGCTG 001120 001121 CAGTCTCAGG AATCCACGGG TTCATTCAGT CGCAACTCTA ATCTCACTAA CTTTATCTGT GTTCCTCAAA TGCCTTAGAC 001200 001201 TATTTGCTTC CCACTGATAG GGAAACCTGA CATCTCATTT TCTCAGTGTC CAGACAAAGA TTCGTACATA GCAAGAAACT 001280 001281 AAGATAGGTG TTACAGAACA TGGAGGGAAC CAGGAAAACC AAATAGAGGA CCCCCTTCAT GGGGCTTCCA ACACGACAAT 001360 001361 AGGCAAAAGA GAAGAAACAT ACATGTAAGA GACAAGCAAA ACCCAGAACC ATCACTTATG AAGGATGTCC TCATCACCCT 001440 001441 CTTTTGCTGC CTGTCAAAAC CGGTGAGGGC TCATATGACA CCTTAATTAT GAATTAATCT TCGTTCCTCC TACACCAGCA 001520 001521 CTTCCCCTCA CCCCAGTCGA AGCCATCTCT TTATATTTCC ATAGCTTAAA ATGCTATTTT TGGTTCTAGA TGCTTTGCCT 001600 001601 CTAGATTTGG ATACTGCATC CATATTGTTG TATATTTTTT CCTTTCTATC TTTTCCACAA TGTTTTTTTT TTTTAACTTT 001680 001681 TAAGTTTAGG GGTCCAAGTG CAGGTTTGTT ACATAGGTAA ACTTGTGTCA TGGGGGCTTG TTGTACAGAT TATTTCATCA 001760 001761 CCAAGATATT AAGCCTAGTA CCCATTAGTT ACGTCTTTCT TCTCCCACCC TCCACCTTCC AAAAGGCCCC AGTATGTGTT 001840 001841 GTACCTCTCT ATGTGTCCAT GTGTTCTCAT CATTTAGCTC CCACTTATAA GTGAGAACGT GCGGTATCTG GCTTTCTGTC 001920 001921 CCTACGTTAG TTTGCTAAGG ATGATGGG |