Difference between revisions of "ENST00000317122.1"
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sequence = <dnaseq>TTGAAATGCTCGATGATCTTCTCTTCCCGCACGTTCTCGGGCCGGGCGTGGCGGCTCACACCTGTAATCTCAGCACTTTGGAAGGCCCTGGCGGAAGGATCTCTTGACGTCAGGACTTCCAAAACAGTTGGGCAACACAGCAAGACCCCGTTCCCAGGCTGGGGGCAAAGCCGGGCTCGGTGGCTCACGCCTGTAATTCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACCTGAGCTCAGGAGTTCGAGACCAGCCTGACCAACATGGTGAAACCCATCTCTACTAAACATACAAAAATTACCCGAGCGTATTGGCGGGCGCCTGTAGTCCCAGCTACATGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGAAGGTTGCAGTGAGCCGAGACTGCGCCACTGCACTACAGCCTGGATGACAAGAGACTCCCGTCTCAAAAAAAAAAAAAAAAAGACACCTTTCTTTGGGCTTAGTGAGCAAACATTCTACGCAGTGCCTAATATAAGCCGGCCCAGGCACCACCCAAGCCTTCGGCCAGGACTGTTTTCCCGTTTCGAGAAGGCTCCATCACACTCCACACGGGATCCAGTCAACAGCCGTTCCAAACATGGCGCGGGAAGGGGTGGAAGACAAGCCAGCGCGACGCCGTCCAGCCTCATCCCCGGGGCACAAAGGGGAGACTAATCTCCAGGAAACTCGGGGTACAGAATCGATAACCCCACAAGAAACTAGTTTCCGCGAGTGGGCCTTAAGGAAAAAGTAGGTCGGGCACAAGCGAGCTGTTCAGACGCACTTCACAGCAAAGACTCGCGGACAACACAGCGAGACGAAAACGGCCCCGTGCGCAGGCGCGCGGAAACACGACTAGCGCGCTTCGGGACGACCCCTCCCCCTTCCCTCAAAGGCCAAGGAAGTGGCTCCGACGCGCTTGCGCGAGGACGGAATGTTGAGGGGAGGGGGAATTCTTTCCCTTCATTGTCAGAGAGAACCGCCCCCGCACGGCGAGCGCGCGCGCGCTCACGCACCACTCTCACACTCCGGCGCGCCAAAGGCTTTCCGCTTGGCGTCTCGCGCATGCGCGGAGGGGGAAGCAGTGGCGAAATTGGATGCTTTTTGCTGAGTTTCTCAGAGAAGTTTCTGGAAAGATGGAGCCAAAGGGACGCTGGGGGGTGGGGAGCGCCAGGAAGCAAGCGTTTGAAAGAAAGCGAAAAAACCCAAGCGCACCGCGACACCTCCAACCTTCAAGCCACGGCCCAAGCAGAGCCCAAGGCCACTGAGACCCTCACGCCAGAGAAAAAGCACAGGGACCGCGGCAGCCGCTCCTCCCTCTGCCACTGCTCAGCCCCCGAGACTCCCCAGCACGGGGAGAGGGCAGGGGGTAGCCATGAGAAACCTAGAGCGCTCACTGGACTTTTGCGAGGTGGAAGGAAAGCCGAAACCCGCCCTTTGGAGCCGCCTGTGCGCACGGGCCCCGTCGAGTGGGCTCAGTACGTTAGGACTCAGCGTGGCCGCCAAAGCATTGGTTGGGGGCGTCTTTCACTAATTTTTCCTAGGTTTTCTCTTCTATCGGGCTCTGTGGTCCTTTCACCACCCATCTTCACTTTGGTGGCCTGACGCTAACGCTGCGAGTTGGGGAAACCGTAGTAACCCCGGGCCTGAGGGGCGTCCCGGGCGGCGGTGCTCCGTTTCTTCCAGCGGTTGCCCCTTTAAGAAAAAGCCCCCCGGAGAGGGGCCCGTGTGGCTGAGTAAAGGTGGCGTGCGCCCGCACAAAGGCGCCGCGTTGTTGGCGGGCTCCGGACCCTGTTGCCCCTGGGCGGGGCGGCGTGGGAAGACCGGGGCGCCTGGGCGGGGAGAACGACGTTGGCGCTAGCGGGGCAGGGCAGGGGGAGGGAGTCACGGGATTTAGCAGGTGCTTCTCCGCGACCGAGCGACTGCCATTTTGTGGTGCGGCCGCCGCCATTTCGCGCGGCCGAGGGGCGGGGTGTGGGCGGAGCGGCGGGCGCGCCCGGGCTGTCCCTCGGGGCGGCGGGCTAACGCGGCCGCTTTGTTCTTCGCTTCTCGGCTCGAGGCCCCAGTCTCGACCGCCGACCGCCTCGGAACCGGGCTGCATCCGAGCTGCCACGCGGCGTGTGAACCTTGAAGCGCGGCCGGGGAATCCGCAAGGCGCCGACTCTCTTCCTCCTTGCAAGCCCTTCGAAAGTGAGATTTCTCACCCCACCCTTGCAGGGTGGAGAGAACACGTTTCAAAAAGGGGATGCCTAGAACTCAGCCGTGGGAAGTGCCTGTCTAAAGCCTTGTGCTGGTGCCAGTAGCAAACCCGTGCGCGTGCTCGGCTTTGAGCGATCATGGAGCTCTGCAAATAGCTCAACTGCAGAGCGTGCCCCTTAGAGCTCCTGTGCTGCTGGGAGGCCTCATAAAGGTGCCAAAACCAGGTGTCCCCAGCGGTTGGCCTCTTT</dnaseq>| | sequence = <dnaseq>TTGAAATGCTCGATGATCTTCTCTTCCCGCACGTTCTCGGGCCGGGCGTGGCGGCTCACACCTGTAATCTCAGCACTTTGGAAGGCCCTGGCGGAAGGATCTCTTGACGTCAGGACTTCCAAAACAGTTGGGCAACACAGCAAGACCCCGTTCCCAGGCTGGGGGCAAAGCCGGGCTCGGTGGCTCACGCCTGTAATTCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACCTGAGCTCAGGAGTTCGAGACCAGCCTGACCAACATGGTGAAACCCATCTCTACTAAACATACAAAAATTACCCGAGCGTATTGGCGGGCGCCTGTAGTCCCAGCTACATGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGGAGGCGAAGGTTGCAGTGAGCCGAGACTGCGCCACTGCACTACAGCCTGGATGACAAGAGACTCCCGTCTCAAAAAAAAAAAAAAAAAGACACCTTTCTTTGGGCTTAGTGAGCAAACATTCTACGCAGTGCCTAATATAAGCCGGCCCAGGCACCACCCAAGCCTTCGGCCAGGACTGTTTTCCCGTTTCGAGAAGGCTCCATCACACTCCACACGGGATCCAGTCAACAGCCGTTCCAAACATGGCGCGGGAAGGGGTGGAAGACAAGCCAGCGCGACGCCGTCCAGCCTCATCCCCGGGGCACAAAGGGGAGACTAATCTCCAGGAAACTCGGGGTACAGAATCGATAACCCCACAAGAAACTAGTTTCCGCGAGTGGGCCTTAAGGAAAAAGTAGGTCGGGCACAAGCGAGCTGTTCAGACGCACTTCACAGCAAAGACTCGCGGACAACACAGCGAGACGAAAACGGCCCCGTGCGCAGGCGCGCGGAAACACGACTAGCGCGCTTCGGGACGACCCCTCCCCCTTCCCTCAAAGGCCAAGGAAGTGGCTCCGACGCGCTTGCGCGAGGACGGAATGTTGAGGGGAGGGGGAATTCTTTCCCTTCATTGTCAGAGAGAACCGCCCCCGCACGGCGAGCGCGCGCGCGCTCACGCACCACTCTCACACTCCGGCGCGCCAAAGGCTTTCCGCTTGGCGTCTCGCGCATGCGCGGAGGGGGAAGCAGTGGCGAAATTGGATGCTTTTTGCTGAGTTTCTCAGAGAAGTTTCTGGAAAGATGGAGCCAAAGGGACGCTGGGGGGTGGGGAGCGCCAGGAAGCAAGCGTTTGAAAGAAAGCGAAAAAACCCAAGCGCACCGCGACACCTCCAACCTTCAAGCCACGGCCCAAGCAGAGCCCAAGGCCACTGAGACCCTCACGCCAGAGAAAAAGCACAGGGACCGCGGCAGCCGCTCCTCCCTCTGCCACTGCTCAGCCCCCGAGACTCCCCAGCACGGGGAGAGGGCAGGGGGTAGCCATGAGAAACCTAGAGCGCTCACTGGACTTTTGCGAGGTGGAAGGAAAGCCGAAACCCGCCCTTTGGAGCCGCCTGTGCGCACGGGCCCCGTCGAGTGGGCTCAGTACGTTAGGACTCAGCGTGGCCGCCAAAGCATTGGTTGGGGGCGTCTTTCACTAATTTTTCCTAGGTTTTCTCTTCTATCGGGCTCTGTGGTCCTTTCACCACCCATCTTCACTTTGGTGGCCTGACGCTAACGCTGCGAGTTGGGGAAACCGTAGTAACCCCGGGCCTGAGGGGCGTCCCGGGCGGCGGTGCTCCGTTTCTTCCAGCGGTTGCCCCTTTAAGAAAAAGCCCCCCGGAGAGGGGCCCGTGTGGCTGAGTAAAGGTGGCGTGCGCCCGCACAAAGGCGCCGCGTTGTTGGCGGGCTCCGGACCCTGTTGCCCCTGGGCGGGGCGGCGTGGGAAGACCGGGGCGCCTGGGCGGGGAGAACGACGTTGGCGCTAGCGGGGCAGGGCAGGGGGAGGGAGTCACGGGATTTAGCAGGTGCTTCTCCGCGACCGAGCGACTGCCATTTTGTGGTGCGGCCGCCGCCATTTCGCGCGGCCGAGGGGCGGGGTGTGGGCGGAGCGGCGGGCGCGCCCGGGCTGTCCCTCGGGGCGGCGGGCTAACGCGGCCGCTTTGTTCTTCGCTTCTCGGCTCGAGGCCCCAGTCTCGACCGCCGACCGCCTCGGAACCGGGCTGCATCCGAGCTGCCACGCGGCGTGTGAACCTTGAAGCGCGGCCGGGGAATCCGCAAGGCGCCGACTCTCTTCCTCCTTGCAAGCCCTTCGAAAGTGAGATTTCTCACCCCACCCTTGCAGGGTGGAGAGAACACGTTTCAAAAAGGGGATGCCTAGAACTCAGCCGTGGGAAGTGCCTGTCTAAAGCCTTGTGCTGGTGCCAGTAGCAAACCCGTGCGCGTGCTCGGCTTTGAGCGATCATGGAGCTCTGCAAATAGCTCAACTGCAGAGCGTGCCCCTTAGAGCTCCTGTGCTGCTGGGAGGCCTCATAAAGGTGCCAAAACCAGGTGTCCCCAGCGGTTGGCCTCTTT</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:ENSG00000179743.2]][[Category:lnc-ZBTB17-1]] | + | [[Category:Intergenic]][[Category:ENSG00000179743.2]][[Category:lnc-ZBTB17-1]][[Category:Transcripts]][[Category:Transcripts]] |
Latest revision as of 14:40, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000317122.1 |
| Source |
Gencode19 |
| Same with |
lnc-ZBTB17-1:1 |
| Classification |
intergenic |
| Length |
2468 nt |
| Genomic location |
chr1-:16160974..16174642 |
| Exon number |
2 |
| Exons |
16160974..16163401,16174603..16174642 |
| Genome context |
|
| Sequence |
000001 TTGAAATGCT CGATGATCTT CTCTTCCCGC ACGTTCTCGG GCCGGGCGTG GCGGCTCACA CCTGTAATCT CAGCACTTTG 000080
000081 GAAGGCCCTG GCGGAAGGAT CTCTTGACGT CAGGACTTCC AAAACAGTTG GGCAACACAG CAAGACCCCG TTCCCAGGCT 000160 000161 GGGGGCAAAG CCGGGCTCGG TGGCTCACGC CTGTAATTCC AGCACTTTGG GAGGCCGAGG TGGGCGGATC ACCTGAGCTC 000240 000241 AGGAGTTCGA GACCAGCCTG ACCAACATGG TGAAACCCAT CTCTACTAAA CATACAAAAA TTACCCGAGC GTATTGGCGG 000320 000321 GCGCCTGTAG TCCCAGCTAC ATGGGAGGCT GAGGCAGGAG AATCGCTTGA ACCCGGGAGG CGAAGGTTGC AGTGAGCCGA 000400 000401 GACTGCGCCA CTGCACTACA GCCTGGATGA CAAGAGACTC CCGTCTCAAA AAAAAAAAAA AAAAGACACC TTTCTTTGGG 000480 000481 CTTAGTGAGC AAACATTCTA CGCAGTGCCT AATATAAGCC GGCCCAGGCA CCACCCAAGC CTTCGGCCAG GACTGTTTTC 000560 000561 CCGTTTCGAG AAGGCTCCAT CACACTCCAC ACGGGATCCA GTCAACAGCC GTTCCAAACA TGGCGCGGGA AGGGGTGGAA 000640 000641 GACAAGCCAG CGCGACGCCG TCCAGCCTCA TCCCCGGGGC ACAAAGGGGA GACTAATCTC CAGGAAACTC GGGGTACAGA 000720 000721 ATCGATAACC CCACAAGAAA CTAGTTTCCG CGAGTGGGCC TTAAGGAAAA AGTAGGTCGG GCACAAGCGA GCTGTTCAGA 000800 000801 CGCACTTCAC AGCAAAGACT CGCGGACAAC ACAGCGAGAC GAAAACGGCC CCGTGCGCAG GCGCGCGGAA ACACGACTAG 000880 000881 CGCGCTTCGG GACGACCCCT CCCCCTTCCC TCAAAGGCCA AGGAAGTGGC TCCGACGCGC TTGCGCGAGG ACGGAATGTT 000960 000961 GAGGGGAGGG GGAATTCTTT CCCTTCATTG TCAGAGAGAA CCGCCCCCGC ACGGCGAGCG CGCGCGCGCT CACGCACCAC 001040 001041 TCTCACACTC CGGCGCGCCA AAGGCTTTCC GCTTGGCGTC TCGCGCATGC GCGGAGGGGG AAGCAGTGGC GAAATTGGAT 001120 001121 GCTTTTTGCT GAGTTTCTCA GAGAAGTTTC TGGAAAGATG GAGCCAAAGG GACGCTGGGG GGTGGGGAGC GCCAGGAAGC 001200 001201 AAGCGTTTGA AAGAAAGCGA AAAAACCCAA GCGCACCGCG ACACCTCCAA CCTTCAAGCC ACGGCCCAAG CAGAGCCCAA 001280 001281 GGCCACTGAG ACCCTCACGC CAGAGAAAAA GCACAGGGAC CGCGGCAGCC GCTCCTCCCT CTGCCACTGC TCAGCCCCCG 001360 001361 AGACTCCCCA GCACGGGGAG AGGGCAGGGG GTAGCCATGA GAAACCTAGA GCGCTCACTG GACTTTTGCG AGGTGGAAGG 001440 001441 AAAGCCGAAA CCCGCCCTTT GGAGCCGCCT GTGCGCACGG GCCCCGTCGA GTGGGCTCAG TACGTTAGGA CTCAGCGTGG 001520 001521 CCGCCAAAGC ATTGGTTGGG GGCGTCTTTC ACTAATTTTT CCTAGGTTTT CTCTTCTATC GGGCTCTGTG GTCCTTTCAC 001600 001601 CACCCATCTT CACTTTGGTG GCCTGACGCT AACGCTGCGA GTTGGGGAAA CCGTAGTAAC CCCGGGCCTG AGGGGCGTCC 001680 001681 CGGGCGGCGG TGCTCCGTTT CTTCCAGCGG TTGCCCCTTT AAGAAAAAGC CCCCCGGAGA GGGGCCCGTG TGGCTGAGTA 001760 001761 AAGGTGGCGT GCGCCCGCAC AAAGGCGCCG CGTTGTTGGC GGGCTCCGGA CCCTGTTGCC CCTGGGCGGG GCGGCGTGGG 001840 001841 AAGACCGGGG CGCCTGGGCG GGGAGAACGA CGTTGGCGCT AGCGGGGCAG GGCAGGGGGA GGGAGTCACG GGATTTAGCA 001920 001921 GGTGCTTCTC CGCGACCGAG CGACTGCCAT TTTGTGGTGC GGCCGCCGCC ATTTCGCGCG GCCGAGGGGC GGGGTGTGGG 002000 002001 CGGAGCGGCG GGCGCGCCCG GGCTGTCCCT CGGGGCGGCG GGCTAACGCG GCCGCTTTGT TCTTCGCTTC TCGGCTCGAG 002080 002081 GCCCCAGTCT CGACCGCCGA CCGCCTCGGA ACCGGGCTGC ATCCGAGCTG CCACGCGGCG TGTGAACCTT GAAGCGCGGC 002160 002161 CGGGGAATCC GCAAGGCGCC GACTCTCTTC CTCCTTGCAA GCCCTTCGAA AGTGAGATTT CTCACCCCAC CCTTGCAGGG 002240 002241 TGGAGAGAAC ACGTTTCAAA AAGGGGATGC CTAGAACTCA GCCGTGGGAA GTGCCTGTCT AAAGCCTTGT GCTGGTGCCA 002320 002321 GTAGCAAACC CGTGCGCGTG CTCGGCTTTG AGCGATCATG GAGCTCTGCA AATAGCTCAA CTGCAGAGCG TGCCCCTTAG 002400 002401 AGCTCCTGTG CTGCTGGGAG GCCTCATAAA GGTGCCAAAA CCAGGTGTCC CCAGCGGTTG GCCTCTTT |
