Difference between revisions of "ENST00000322227.2"

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sequence = <dnaseq>AGTTAGGTGAAGAGGAGAACGATGTCCAGGCAGGGGCCGGGGAAGCTCGTGCCAAGGCACTGAGGGGAAGTGCTGCAATGAACCTCAGAGGCTGGATCTTGCTGACTCATCTGGGGTACCAAGGACAGACAAAGGACATGGAGTCCAGGCCCAGGAGGCGATACCAGGCCAGCAGTTTCACTGATGCTCCTGTCATGACGATGACTGCCTCCCTCCTCCCCTTGGTCCCTGACTCAGTGTCTGCAGTGACCAGGCACCAGGCAGGGAGCAAGGAACCAAGCCTTTCACCTGCTCCCACCAACTCCTATGGTGCTCCCTTTCCAAGGCTAGGTCTCCTCTCCACCCAGTTCCTTATCACGTACCATGAGAAGCTGTCACCTTGGCAACTGTCACCTTCTGGTGAGATTTACAATTGCACTGCTACAACTGCTTGTGGCATGGTAAAGTTGCACCAGGACCTCTGCTGTCCATGAGATCAAAGTTCCAGGCCAAGGCACCAGGGGCACGAACAGTGTTGCCCGCATGGAACTCACACTTAATGGGAGCGGCAGCCAACAGAGTCTTGCTGTGTCACCCAGGCCGGAGTGCACTAGCACAATCTCAGCTCATTGCAACCTCCATCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCCTGTGCCACTATGCTAATTTTTTTTTTTTGTATTATTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGCCGGTCTTGAACTTCTGACCTCAAGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCTCCTGGCTGAGGCCACCTCTTTTCTTGGGGACACTTGGGCTCCAGCTTTCTCCATTCATCAGCTTAGCATGAGCTTGAGGAACGCAGAGGGGGGCTGACTGAGAGGAGCAGGCACTGGGGACAATGGGGACATCCACGGTTCCTAGCAATGGATTTGAGGTGGGATTTCCAATTCCTCTTCTCCCACCTTGGATTTGACCATCTGAATACCAAATTCCTGTCACTTCTAGGATGTCACCTAAGATGAGACTGTGGTCTTTCCACTCTTGGGTCCCAAGGAGGTGCCACAGGGCCTACAATAAGGCAAGGAAGGCTCAGTGAGGTCCGTGTTCACCCCACCCCCACTTCAACACGAGGAGTTCTGCTTTTATTTTGCCTCTGTGTGTGTGTGTGTGTGTGTGTGTTTCTAGGTATTATTTTATTTGGAGAAAGGATTTGCTCCTAAGGACACACACACGCACACACACATGCACACTCACGCACACGTACTCACAGGTTCTGCAAAACACTAGTGTGGCAGAAAGTGTTGAAAACTAGTTCTAGACCTGGCATGAATTTGACCAGGTTCAGCCTTAGTCTCCTCTCTTAGAAATAAGGTCATCTGGGCCAGGTGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACGAGATCAGGACCTCAAGACCAGCCTGACCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGCACGTGCCTATAATCCCAGCTAGTCTGGAGGGTGAGGCAGGAGAATCGCTGGAACCTGGGAGGCAGAGGTTGCGGCGAGCCGAGATCATGTGAGGAAATAAGGCCATCTGGAAATATCCTTCCCATCACAGGATGATACCCGGCAAATTCTTCAAAGCAGTGTTCTCCAACTTGAATGTTTGTGATGTGGGCGATTCTGACTGAGGGGGTCTGTAGACCACATCTTGATAAACAATGCTTTTTAAAAAATTCCTAGAAGAGAATATTTGATTTCTGGAAGGATAGAGAAGAAACTAATAAGAGTGTTTACCTCCGAGGAGGAGGAGAATTGGGAAGCTGAGAGCAGAGGAGGGAGGAAGACTTACTTTTCACCGTGTTCTTTTTTGTACCTTTTGAGTTTTGTACGACATACTGAATCTTTGACCCATTTGCAATTATAAATAAAGGCACATTTATTTGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGACGAGGTGGGTGGATCACCTAAGGTCAGGAGTTAGTGACCAGCCTGGCCAACATGGTGAAACCTCGCTCTACTAAAACACAAAAATTAGCCAGATGTGGTGGCAGGCACCTGTAATCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCACGACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCTGTCTC</dnaseq>|
 
sequence = <dnaseq>AGTTAGGTGAAGAGGAGAACGATGTCCAGGCAGGGGCCGGGGAAGCTCGTGCCAAGGCACTGAGGGGAAGTGCTGCAATGAACCTCAGAGGCTGGATCTTGCTGACTCATCTGGGGTACCAAGGACAGACAAAGGACATGGAGTCCAGGCCCAGGAGGCGATACCAGGCCAGCAGTTTCACTGATGCTCCTGTCATGACGATGACTGCCTCCCTCCTCCCCTTGGTCCCTGACTCAGTGTCTGCAGTGACCAGGCACCAGGCAGGGAGCAAGGAACCAAGCCTTTCACCTGCTCCCACCAACTCCTATGGTGCTCCCTTTCCAAGGCTAGGTCTCCTCTCCACCCAGTTCCTTATCACGTACCATGAGAAGCTGTCACCTTGGCAACTGTCACCTTCTGGTGAGATTTACAATTGCACTGCTACAACTGCTTGTGGCATGGTAAAGTTGCACCAGGACCTCTGCTGTCCATGAGATCAAAGTTCCAGGCCAAGGCACCAGGGGCACGAACAGTGTTGCCCGCATGGAACTCACACTTAATGGGAGCGGCAGCCAACAGAGTCTTGCTGTGTCACCCAGGCCGGAGTGCACTAGCACAATCTCAGCTCATTGCAACCTCCATCTCCCAGGTTCAAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTACAGGCCTGTGCCACTATGCTAATTTTTTTTTTTTGTATTATTAGTAGAGACAGGGTTTCACCATGTTAGCCAGGCCGGTCTTGAACTTCTGACCTCAAGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCTCCTGGCTGAGGCCACCTCTTTTCTTGGGGACACTTGGGCTCCAGCTTTCTCCATTCATCAGCTTAGCATGAGCTTGAGGAACGCAGAGGGGGGCTGACTGAGAGGAGCAGGCACTGGGGACAATGGGGACATCCACGGTTCCTAGCAATGGATTTGAGGTGGGATTTCCAATTCCTCTTCTCCCACCTTGGATTTGACCATCTGAATACCAAATTCCTGTCACTTCTAGGATGTCACCTAAGATGAGACTGTGGTCTTTCCACTCTTGGGTCCCAAGGAGGTGCCACAGGGCCTACAATAAGGCAAGGAAGGCTCAGTGAGGTCCGTGTTCACCCCACCCCCACTTCAACACGAGGAGTTCTGCTTTTATTTTGCCTCTGTGTGTGTGTGTGTGTGTGTGTGTTTCTAGGTATTATTTTATTTGGAGAAAGGATTTGCTCCTAAGGACACACACACGCACACACACATGCACACTCACGCACACGTACTCACAGGTTCTGCAAAACACTAGTGTGGCAGAAAGTGTTGAAAACTAGTTCTAGACCTGGCATGAATTTGACCAGGTTCAGCCTTAGTCTCCTCTCTTAGAAATAAGGTCATCTGGGCCAGGTGCGGTGGCTCAAGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACGAGATCAGGACCTCAAGACCAGCCTGACCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAGGCATGGTGGCACGTGCCTATAATCCCAGCTAGTCTGGAGGGTGAGGCAGGAGAATCGCTGGAACCTGGGAGGCAGAGGTTGCGGCGAGCCGAGATCATGTGAGGAAATAAGGCCATCTGGAAATATCCTTCCCATCACAGGATGATACCCGGCAAATTCTTCAAAGCAGTGTTCTCCAACTTGAATGTTTGTGATGTGGGCGATTCTGACTGAGGGGGTCTGTAGACCACATCTTGATAAACAATGCTTTTTAAAAAATTCCTAGAAGAGAATATTTGATTTCTGGAAGGATAGAGAAGAAACTAATAAGAGTGTTTACCTCCGAGGAGGAGGAGAATTGGGAAGCTGAGAGCAGAGGAGGGAGGAAGACTTACTTTTCACCGTGTTCTTTTTTGTACCTTTTGAGTTTTGTACGACATACTGAATCTTTGACCCATTTGCAATTATAAATAAAGGCACATTTATTTGGCCGGGCGCGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGACGAGGTGGGTGGATCACCTAAGGTCAGGAGTTAGTGACCAGCCTGGCCAACATGGTGAAACCTCGCTCTACTAAAACACAAAAATTAGCCAGATGTGGTGGCAGGCACCTGTAATCCCAGCTACTCAGAAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGCACGACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCTGTCTC</dnaseq>|
 
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[[Category:Intergenic]]
+
[[Category:Intergenic]][[Category:lnc-ABI3-2]]

Revision as of 10:42, 13 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000322227.2

Source

Gencode19

Same with

lnc-ABI3-2:5,NONHSAT054515

Classification

intergenic

Length

2317 nt

Genomic location

chr17+:47325601..47333811

Exon number

4

Exons

47325601..47325664,47329608..47330036,47330216..47330280,47332053..47333811

Genome context

Sequence
000001 AGTTAGGTGA AGAGGAGAAC GATGTCCAGG CAGGGGCCGG GGAAGCTCGT GCCAAGGCAC TGAGGGGAAG TGCTGCAATG 000080
000081 AACCTCAGAG GCTGGATCTT GCTGACTCAT CTGGGGTACC AAGGACAGAC AAAGGACATG GAGTCCAGGC CCAGGAGGCG 000160
000161 ATACCAGGCC AGCAGTTTCA CTGATGCTCC TGTCATGACG ATGACTGCCT CCCTCCTCCC CTTGGTCCCT GACTCAGTGT 000240
000241 CTGCAGTGAC CAGGCACCAG GCAGGGAGCA AGGAACCAAG CCTTTCACCT GCTCCCACCA ACTCCTATGG TGCTCCCTTT 000320
000321 CCAAGGCTAG GTCTCCTCTC CACCCAGTTC CTTATCACGT ACCATGAGAA GCTGTCACCT TGGCAACTGT CACCTTCTGG 000400
000401 TGAGATTTAC AATTGCACTG CTACAACTGC TTGTGGCATG GTAAAGTTGC ACCAGGACCT CTGCTGTCCA TGAGATCAAA 000480
000481 GTTCCAGGCC AAGGCACCAG GGGCACGAAC AGTGTTGCCC GCATGGAACT CACACTTAAT GGGAGCGGCA GCCAACAGAG 000560
000561 TCTTGCTGTG TCACCCAGGC CGGAGTGCAC TAGCACAATC TCAGCTCATT GCAACCTCCA TCTCCCAGGT TCAAGTGATT 000640
000641 CTCCTGCCTC AGCCTCCCGA GTAGCTGGGA TTACAGGCCT GTGCCACTAT GCTAATTTTT TTTTTTTGTA TTATTAGTAG 000720
000721 AGACAGGGTT TCACCATGTT AGCCAGGCCG GTCTTGAACT TCTGACCTCA AGTGATCTGC CCACCTCGGC CTCCCAAAGT 000800
000801 GCTGGGATTA CAGGTGTGAG CCACCGCTCC TGGCTGAGGC CACCTCTTTT CTTGGGGACA CTTGGGCTCC AGCTTTCTCC 000880
000881 ATTCATCAGC TTAGCATGAG CTTGAGGAAC GCAGAGGGGG GCTGACTGAG AGGAGCAGGC ACTGGGGACA ATGGGGACAT 000960
000961 CCACGGTTCC TAGCAATGGA TTTGAGGTGG GATTTCCAAT TCCTCTTCTC CCACCTTGGA TTTGACCATC TGAATACCAA 001040
001041 ATTCCTGTCA CTTCTAGGAT GTCACCTAAG ATGAGACTGT GGTCTTTCCA CTCTTGGGTC CCAAGGAGGT GCCACAGGGC 001120
001121 CTACAATAAG GCAAGGAAGG CTCAGTGAGG TCCGTGTTCA CCCCACCCCC ACTTCAACAC GAGGAGTTCT GCTTTTATTT 001200
001201 TGCCTCTGTG TGTGTGTGTG TGTGTGTGTG TTTCTAGGTA TTATTTTATT TGGAGAAAGG ATTTGCTCCT AAGGACACAC 001280
001281 ACACGCACAC ACACATGCAC ACTCACGCAC ACGTACTCAC AGGTTCTGCA AAACACTAGT GTGGCAGAAA GTGTTGAAAA 001360
001361 CTAGTTCTAG ACCTGGCATG AATTTGACCA GGTTCAGCCT TAGTCTCCTC TCTTAGAAAT AAGGTCATCT GGGCCAGGTG 001440
001441 CGGTGGCTCA AGCCTGTAAT CCCAGCACTT TGGGAGGCCG AGGTGGGCGG ATCACGAGAT CAGGACCTCA AGACCAGCCT 001520
001521 GACCAACATG GTGAAACCCC GTCTCTACTA AAAATACAAA AATTAGCCAG GCATGGTGGC ACGTGCCTAT AATCCCAGCT 001600
001601 AGTCTGGAGG GTGAGGCAGG AGAATCGCTG GAACCTGGGA GGCAGAGGTT GCGGCGAGCC GAGATCATGT GAGGAAATAA 001680
001681 GGCCATCTGG AAATATCCTT CCCATCACAG GATGATACCC GGCAAATTCT TCAAAGCAGT GTTCTCCAAC TTGAATGTTT 001760
001761 GTGATGTGGG CGATTCTGAC TGAGGGGGTC TGTAGACCAC ATCTTGATAA ACAATGCTTT TTAAAAAATT CCTAGAAGAG 001840
001841 AATATTTGAT TTCTGGAAGG ATAGAGAAGA AACTAATAAG AGTGTTTACC TCCGAGGAGG AGGAGAATTG GGAAGCTGAG 001920
001921 AGCAGAGGAG GGAGGAAGAC TTACTTTTCA CCGTGTTCTT TTTTGTACCT TTTGAGTTTT GTACGACATA CTGAATCTTT 002000
002001 GACCCATTTG CAATTATAAA TAAAGGCACA TTTATTTGGC CGGGCGCGGT GGCTCATGCC TGTAATCCCA GCACTTTGGG 002080
002081 AGGACGAGGT GGGTGGATCA CCTAAGGTCA GGAGTTAGTG ACCAGCCTGG CCAACATGGT GAAACCTCGC TCTACTAAAA 002160
002161 CACAAAAATT AGCCAGATGT GGTGGCAGGC ACCTGTAATC CCAGCTACTC AGAAGGCTGA GGCAGGAGAA TCGCTTGAAC 002240
002241 CTGGGAGGCA GAGGTTGCAG TGAGCTGAGA TCGCACGACT GCACTCCAGC CTGGGCAACA GAGTGAGACT CTGTCTC
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