ENST00000420598.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000420598.1

Source

Gencode19

Same with

lnc-PPIAL4G-6:6,NONHSAT005679

Classification

intergenic

Length

557 nt

Genomic location

chr1-:143188509..143195834

Exon number

5

Exons

143188509..143188589,143189434..143189487,143190655..143190700,143194122..143194342,143195680..143195834

Genome context

Sequence
000001 CTAAATAAGA AGGAACTCAC ACTTAAAGAT GTGGAATGTA AATTCTACAA AATGAAAACT GCTTATGAAG AGGTTACAAC 000080
000081 TGAGTTAGAA GAATATAAGG AAGCCTTTGC AGCAGCATTG AAAGCTAATA GTTCCATGTC AAAAAAATTA ACTAAATCGA 000160
000161 ATAAGAAAAT AGCAATGATC AGTATCAGCT CTTTATGGAG AAAGAGCAGG TGAAATATTT TCTCAGCACT CTTCCTACAA 000240
000241 GGCGAGGTCG AGAGTCACCT TGTGTTGAAA ATCTTACTAG TATAGGACTC AACAGAAAAT ATATTCCCCA AATGCCCGTA 000320
000321 AGAATTCCTA CTTCAAACCT CAGACTTCAA ATAACTGCCA GAACTACTTG ACTGAGATGG GGCCGGACTG TGTAGAATAA 000400
000401 ATAATTAGAG AAACAAAGAG AACTGTTGCT GTATTGGACA CTTGCTCCCA TCTACTTTCT TCTCTGGAAT CCACGGCCAC 000480
000481 TGAGGAAGCA CAGGTGAGCC CTCCCCAGTG TGTACTCACT GGTCCCCAAC AGAAGAACCA CTGCCACATC CACTGAG
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Predicted Small Protein

Name ENST00000420598.1_smProtein_194:370
Length 59
Molecular weight 6733.8006
Aromaticity 0.051724137931
Instability index 53.5465517241
Isoelectric point 10.506652832
Runs 11
Runs residual 0.0330617658204
Runs probability 0.0364375070258
Amino acid sequence MEKEQVKYFLSTLPTRRGRESPCVENLTSIGLNRKYIPQMPVRIPTSNLRLQITARTT
Secondary structure LLHHHHHHLLLLLLLLLLLLLLLLLLLEELLLLEEEELLLLEEELLLLLEEEEEEELL
PRMN -
PiMo -