ENST00000426358.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000426358.1

Source

Gencode19

Same with

lnc-PAX5-1:1

Classification

intergenic

Length

947 nt

Genomic location

chr9-:37073528..37075789

Exon number

2

Exons

37073528..37073864,37075180..37075789

Genome context

Sequence
000001 ACAATGCGCA GCTGAATTGG GATGAGGGGC CAGGACAAAG CAGAAATCTG CTGCAGAGAG CAGGAAAGAT ATTCTGTAGC 000080
000081 AGGATCTGGG CAAGCGGCAC TCATCCATAT CCTTTGCATT GCAAAGAGAG GAGCTACCTC CTTCCTTTTT ATTTTCCAGT 000160
000161 TTATTGGTGG CTCCTAGAAC CTCTGAGAAC TAACTGATTT TGACCTCTTA ACAGTTGCCT TTCAACTACC ATTCATTTAC 000240
000241 TGCAAGCCTA CTGTGTAACA GGCCCTTGCT AACCACTTCA GATATATTGT CTCTTGTCCA GCTTCAAGTG ACTCTCTTAG 000320
000321 GGAGGGATTA GCCTCACCTC ACTAGTATGG AAATGGAGAC TTGGAGTAAT CAAGTGACTT GCTCTGAATT ACACAGCTGG 000400
000401 GAAGTGGTGA AGCTGGAATT CAACTCAAGT TATGTCTAGA TCTAAAACTC ATGCTCTTTT CTATGCTCAA AGCTGCATAT 000480
000481 CAAAACTGAA CTTTAGCATG GAGTCTATGA TGACTGGCTC ATGTCTCTCC ACCCAGCACC TAGCCCAAGG CCAAGCACAG 000560
000561 AGAAGGCTCA CAGTGGACAC TTTTGGAATG AGTAGATTTT TTATGGAATG GTCGAGCACA CTGAACTACC TGGAGTAAAG 000640
000641 GGGCATCATG TCTGAAACTG ATGCTTAAGT GGCTCAGAAA AAAAATTCTG GGAGCTAGAG GGAGAGAGAG ACAGAGGAGT 000720
000721 GTGGTAAAAA GTTAACATTT TGGGGATCTG CGTAAAGGTA TATGAGGATT CTTTGTACAG ATTTTGCAAT TTTTCTCCAA 000800
000801 ATGTGAAATT ATGTCAAAAT ATAAAATTAA AAGACAAAAT TAAAAGAATG AATGAGAGTT TGCTAGGTAG AGAAGCAGGG 000880
000881 GGATCTTCTG GCAAAGGAAC AGGATAAGCA AAAGCATCAC AAGTGTGCGA GTCTTCTGTG TTGACAA
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Predicted Small Protein

Name ENST00000426358.1_smProtein_431:637
Length 69
Molecular weight 7810.88
Aromaticity 0.117647058824
Instability index 64.6707352941
Isoelectric point 8.80316162109
Runs 12
Runs residual 0.0359697933227
Runs probability 0.0238252958841
Amino acid sequence MSRSKTHALFYAQSCISKLNFSMESMMTGSCLSTQHLAQGQAQRRLTVDTFGMSRFFMEW
SSTLNYLE
Secondary structure LLLLHHHHHHHHHHHHHHHHHLHHHHHHLLHHHHHHHHHHHHHHHEEELLLLHHHHEEEH
HHHHLLLL
PRMN -
PiMo -