ENST00000427579.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000427579.1 |
Source |
Gencode19 |
Same with |
lnc-ETAA1-7:1,NONHSAT071258 |
Classification |
intergenic |
Length |
567 nt |
Genomic location |
chr2+:67267678..67269098 |
Exon number |
2 |
Exons |
67267678..67268197,67269052..67269098 |
Genome context |
|
Sequence |
000001 ACACACACAC ACACACACAC ACACACACAC ACACACACAC ACACGCTTTA CCTATTCATC CCATCCCTCC CCTATCCTCC 000080
000081 CAACTATCCA CCCACTAGTC ATCATCCATC CCATCTAGGA TTGTCAGTTT TAAGAAAATC AAGACACCCA GTGAAATTTC 000160 000161 AATTCAGATA AACAACAAAT AATACTTTAG TATAAGTCCC ATGCAATACT TAGGACACAT TTTTTCTGAA ATATCATTCA 000240 000241 CCATTTATTT TACATTCAAA TTTCACTGGA TGCCTGTATT TTATCTGGCA AACCTAATCC GATCACAAAT GTCTACATCT 000320 000321 TTTCCATTTA TCTCCTAATT CCATGACTCT TTCAACTGCT TTTCTCCTTT AACTCCTATT ATTTCAGATT TCAGCTAAAC 000400 000401 AAACTACAAC CTATTTTCCC AGTGTTTCCA AACCTGTCCC GAGGCAGAGA TGATTGTAAA GAGCCCCTCA GGAGCACTTA 000480 000481 TTTGTGGTTT CTAGGCTGAA GGCTGGCTGT GCAACTTTGG CATTCTTGAT CTATCACCTG TGACTGAAAG CTCCCAAACT 000560 000561 GATGCAA |
Predicted Small Protein
Name | ENST00000427579.1_smProtein_200:337 |
Length | 46 |
Molecular weight | 5475.3617 |
Aromaticity | 0.266666666667 |
Instability index | 82.4335555556 |
Isoelectric point | 8.23004150391 |
Runs | 9 |
Runs residual | 0.0377525252525 |
Runs probability | 0.0236805432884 |
Amino acid sequence | MQYLGHIFSEISFTIYFTFKFHWMPVFYLANLIRSQMSTSFPFIS |
Secondary structure | LLEELLEEELEEEEEEEEEEEEELHHHHHHHHHHHHHLLLLLLLL |
PRMN | LLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PiMo | oooooooooooooTTTTTTTTTTTTTTTTTTTiiiiiiiiiiiii |