Difference between revisions of "ENST00000429010.1"

From LncRNAWiki
Jump to: navigation, search
Line 42: Line 42:
 
sequence = <dnaseq>GTGTTAATCAGCTCAATTAGACTCCCTTCCTTATCACACGGACAGAGGGCTTTCTGTATCCTGGGGTTTCTTGTCTTGGTGTACCGGAAGAATTGGATCATGGGTGGGCTTGGAGAATGAGTGCAAGGTTCTATTGAGTAGAAGTAGCCCTCAGCAGATGGGGGAGCCAGAAGGGAGATGGTTTTTGCCTGCAGTCAGGCCACTTGGCCGCCCCAGCTCTCCTCTGACTGCTCCAGCCAAACTCCGCCTCATTCTGCCAGTCGATGGCCAGCATGTCGGCATCTGTTGATGTGCTCTTCTGCTGGCATGCTCCCTCGACGTTCTCTCAATATCCGGCCGCCTGTGTCTTCTTCTGCTGATCTGCTCCTCTCCACATCCAGCGGCTTGTGTGTCTGCCTGATGAGGTCAGGAAGTGGCTAAGAAGAGATCCATGAAGATTAACATTCAGTGCTCAATTTCTGAAGGAAACAGGGAGTGAAAGGCCGTGGAAGAAAACAGGGCTGCCACGAACATGCTCTTGGCTGTTTGAAAAGATCCAGCGCAGCTTGAACTTCAAAAATAACTCCATTCACTATGGTTGCAGTTGGGCTTGGGGAATTTCTCACAATCAAAAGCAGCTGCTTCATCTCATTTAGCCATTAGGCTGAGCTCCACAGGCTCGCTGCAGGATCTTAGAGCCTACAAGGCCCTGCTAAGAGTAGCCGCGTTTTCCAGCATGCAGTAGATCAGCGAGTGTTTACATTTGTGTTTGGAATGCTCATGAGTCCTTTGGGGCAAAGACTGAGTCATTAATCAGAGCTTTCTATGAACGTATTGCTGCCCAAGCCTCTGTGAATGTGAGTACGGCCTTGTCCCCTGAGTGACGCTGAAAGAGAGTGAAGCACATGTGCTCCATAGGACTGCCACGGCCACCCCTCTCATTCACTTTTCCATTCAGCGCTGAGACTAAGTTTAACTCATTTTTCTTTTGTTGTGAAAAGAGAATGCACACAAAAATTCAAATGTTACCAAATCGATATCAGGTTGGAAGCTGATTCCCCTTGCCTGAGTCCGGGCTGTGTTTGGCGATACTTGTAAAGAATGGAATCTGGCTGAGGTGGAGGTGTGTGACTTTGAGGACTAGGTCCAAAGAAGGCATTGTGGTTTCCATCTTGACTGCTCTTTCCCTTGGATAGCTGACTCTTAGGGAAGCCACATGCCACACCATGAGCAGCTCTGCGGAGAGACCCATGCAGCAAGGAAATGAGGCTTCCAGTCAAGAGCTGCATGACTGAATGAACTTGTTACCAAAACACCAGGGGTTTGGTCCAGGTCCTTCTGCTCACCGCATGGAAAGCTCATCACTGAGATGACAAGTATTGCCAAGGAAGGATTTAATCAGGTGCTGCAACCGAGGAGATGGGAGCTCAGTCTCAAATCCATCTTGCTGACCTACTAAAACGAGGGATTTGTATAGCAGGGAAGAAATGAAACAATGTGTAAGAAAACAGCAACTAGGGAGGGGCACGGAAGCAATCATGATGAATGAGGGGGCAGCATCTCATTGTCTGAATGCGGTGATCTGGCCTTAGCTGCCTTCCCGCGGGGCAGGCCTCGGGACTGCAGCCCACCATGCCTGAGCCTTCCCCCTCCTCCGTGGATTCCTGTGCAGCCGGAGCCTCCCCGACGAGCGCCACCCCCTGCTCCATGGCGCCCAGTCCCATCGACCGCCTAAGGGCTGAAGAGTGCGGGCGCAAGGCACCGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGCGGGATCCACTGGGTGAAGCCAGCTGGACTCCTGAGTCTGGTGGGGCCTTGGAGAACTTTTATGTCTAGCTCAGGGATTGTAAATACACCGATCGGTACTCTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTCTAGCTCAAGGTTTGTGAGTGCACCAATCGACACTCTGTATCTAGCTGCTCTGGTGGGGCCTTAGAGAACCTTTGCGTGGATACTCTGTATCTAACTAATCTGATAGGGACGTGGAGAACCTTTATATCTAGCTCAGGGATTGTAAACGCACCAATCAGCACCCTGTCAAAACAGACCACTTGGCTCTACCAATCAGCAGGATGTGGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCGGAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGTGGAAAGTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCTGCTGCTCACTTTTTGGGTCCACACTGCTCTTATGAGCTGTAACACTCACCGCGAAAATCTGTAGCTTCATTCCTGAAGCCAGCGAGCCCACGAGCCCACCGGGAAGAACGAACAACTCCAGACGTGCCGCCTTAAGAGCTGTAACACTCACCGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACTAACCCACCAGAAGGAAGAAACTCCGAACATCAGAAGGAACAAACTCCAGACGCGCCACCTTAAGAGCTGTAACACTCACTGCGAGGGTCCGCGACTTCATTCTTGAAGTCAGTGAAACCAAGAATCCACCAATTCCGGACACACTATCACCCATGAAGAGTAGTTACTGTAACATTGTAGCACACTGCATTACTCAGGTGTTTGTGGGGTTGCTGATGTGAACAAACCTGCATGGCCAGTTGCATAAAAGTATAGCACACACGATTATGTACAGCCCATAATACGTGATAGTGATAATAAATGACTGTTACTGGTTTATGT</dnaseq>|
 
sequence = <dnaseq>GTGTTAATCAGCTCAATTAGACTCCCTTCCTTATCACACGGACAGAGGGCTTTCTGTATCCTGGGGTTTCTTGTCTTGGTGTACCGGAAGAATTGGATCATGGGTGGGCTTGGAGAATGAGTGCAAGGTTCTATTGAGTAGAAGTAGCCCTCAGCAGATGGGGGAGCCAGAAGGGAGATGGTTTTTGCCTGCAGTCAGGCCACTTGGCCGCCCCAGCTCTCCTCTGACTGCTCCAGCCAAACTCCGCCTCATTCTGCCAGTCGATGGCCAGCATGTCGGCATCTGTTGATGTGCTCTTCTGCTGGCATGCTCCCTCGACGTTCTCTCAATATCCGGCCGCCTGTGTCTTCTTCTGCTGATCTGCTCCTCTCCACATCCAGCGGCTTGTGTGTCTGCCTGATGAGGTCAGGAAGTGGCTAAGAAGAGATCCATGAAGATTAACATTCAGTGCTCAATTTCTGAAGGAAACAGGGAGTGAAAGGCCGTGGAAGAAAACAGGGCTGCCACGAACATGCTCTTGGCTGTTTGAAAAGATCCAGCGCAGCTTGAACTTCAAAAATAACTCCATTCACTATGGTTGCAGTTGGGCTTGGGGAATTTCTCACAATCAAAAGCAGCTGCTTCATCTCATTTAGCCATTAGGCTGAGCTCCACAGGCTCGCTGCAGGATCTTAGAGCCTACAAGGCCCTGCTAAGAGTAGCCGCGTTTTCCAGCATGCAGTAGATCAGCGAGTGTTTACATTTGTGTTTGGAATGCTCATGAGTCCTTTGGGGCAAAGACTGAGTCATTAATCAGAGCTTTCTATGAACGTATTGCTGCCCAAGCCTCTGTGAATGTGAGTACGGCCTTGTCCCCTGAGTGACGCTGAAAGAGAGTGAAGCACATGTGCTCCATAGGACTGCCACGGCCACCCCTCTCATTCACTTTTCCATTCAGCGCTGAGACTAAGTTTAACTCATTTTTCTTTTGTTGTGAAAAGAGAATGCACACAAAAATTCAAATGTTACCAAATCGATATCAGGTTGGAAGCTGATTCCCCTTGCCTGAGTCCGGGCTGTGTTTGGCGATACTTGTAAAGAATGGAATCTGGCTGAGGTGGAGGTGTGTGACTTTGAGGACTAGGTCCAAAGAAGGCATTGTGGTTTCCATCTTGACTGCTCTTTCCCTTGGATAGCTGACTCTTAGGGAAGCCACATGCCACACCATGAGCAGCTCTGCGGAGAGACCCATGCAGCAAGGAAATGAGGCTTCCAGTCAAGAGCTGCATGACTGAATGAACTTGTTACCAAAACACCAGGGGTTTGGTCCAGGTCCTTCTGCTCACCGCATGGAAAGCTCATCACTGAGATGACAAGTATTGCCAAGGAAGGATTTAATCAGGTGCTGCAACCGAGGAGATGGGAGCTCAGTCTCAAATCCATCTTGCTGACCTACTAAAACGAGGGATTTGTATAGCAGGGAAGAAATGAAACAATGTGTAAGAAAACAGCAACTAGGGAGGGGCACGGAAGCAATCATGATGAATGAGGGGGCAGCATCTCATTGTCTGAATGCGGTGATCTGGCCTTAGCTGCCTTCCCGCGGGGCAGGCCTCGGGACTGCAGCCCACCATGCCTGAGCCTTCCCCCTCCTCCGTGGATTCCTGTGCAGCCGGAGCCTCCCCGACGAGCGCCACCCCCTGCTCCATGGCGCCCAGTCCCATCGACCGCCTAAGGGCTGAAGAGTGCGGGCGCAAGGCACCGGGACTGGCAGGCAGCTCCACCTGCAGCCCCGGTGCGGGATCCACTGGGTGAAGCCAGCTGGACTCCTGAGTCTGGTGGGGCCTTGGAGAACTTTTATGTCTAGCTCAGGGATTGTAAATACACCGATCGGTACTCTGTATCTAGCTCAAGGTTTGTAAACACACCAATCAGCACCCTGTGTCTAGCTCAAGGTTTGTGAGTGCACCAATCGACACTCTGTATCTAGCTGCTCTGGTGGGGCCTTAGAGAACCTTTGCGTGGATACTCTGTATCTAACTAATCTGATAGGGACGTGGAGAACCTTTATATCTAGCTCAGGGATTGTAAACGCACCAATCAGCACCCTGTCAAAACAGACCACTTGGCTCTACCAATCAGCAGGATGTGGGTGGGGCCAGATAAGAGAATAAAAGCAGGCTGCCGGAGCCAGCAGTGGCAACCCACTGGGGTCTCCTTCCACACTGTGGAAAGTTTGTTCTTTCGCTCTTTGCAATAAATCTTGCTGCTGCTCACTTTTTGGGTCCACACTGCTCTTATGAGCTGTAACACTCACCGCGAAAATCTGTAGCTTCATTCCTGAAGCCAGCGAGCCCACGAGCCCACCGGGAAGAACGAACAACTCCAGACGTGCCGCCTTAAGAGCTGTAACACTCACCGCGAAGGTCTGCAGCTTCACTCCTGAGCCAGCGAGACCACTAACCCACCAGAAGGAAGAAACTCCGAACATCAGAAGGAACAAACTCCAGACGCGCCACCTTAAGAGCTGTAACACTCACTGCGAGGGTCCGCGACTTCATTCTTGAAGTCAGTGAAACCAAGAATCCACCAATTCCGGACACACTATCACCCATGAAGAGTAGTTACTGTAACATTGTAGCACACTGCATTACTCAGGTGTTTGTGGGGTTGCTGATGTGAACAAACCTGCATGGCCAGTTGCATAAAAGTATAGCACACACGATTATGTACAGCCCATAATACGTGATAGTGATAATAAATGACTGTTACTGGTTTATGT</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-C7orf65-1]][[Category:NONHSAG047543]][[Category:ENSG00000236078.1]]
+
[[Category:Intergenic]][[Category:lnc-C7orf65-1]][[Category:NONHSAG047543]][[Category:ENSG00000236078.1]][[Category:Transcripts]]

Revision as of 11:48, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000429010.1

Source

Gencode19

Same with

lnc-C7orf65-1:1,NONHSAT120517

Classification

intergenic

Length

2761 nt

Genomic location

chr7+:47661537..47669491

Exon number

4

Exons

47661537..47661935,47662710..47663332,47666859..47667400,47668295..47669491

Genome context

Sequence
000001 GTGTTAATCA GCTCAATTAG ACTCCCTTCC TTATCACACG GACAGAGGGC TTTCTGTATC CTGGGGTTTC TTGTCTTGGT 000080
000081 GTACCGGAAG AATTGGATCA TGGGTGGGCT TGGAGAATGA GTGCAAGGTT CTATTGAGTA GAAGTAGCCC TCAGCAGATG 000160
000161 GGGGAGCCAG AAGGGAGATG GTTTTTGCCT GCAGTCAGGC CACTTGGCCG CCCCAGCTCT CCTCTGACTG CTCCAGCCAA 000240
000241 ACTCCGCCTC ATTCTGCCAG TCGATGGCCA GCATGTCGGC ATCTGTTGAT GTGCTCTTCT GCTGGCATGC TCCCTCGACG 000320
000321 TTCTCTCAAT ATCCGGCCGC CTGTGTCTTC TTCTGCTGAT CTGCTCCTCT CCACATCCAG CGGCTTGTGT GTCTGCCTGA 000400
000401 TGAGGTCAGG AAGTGGCTAA GAAGAGATCC ATGAAGATTA ACATTCAGTG CTCAATTTCT GAAGGAAACA GGGAGTGAAA 000480
000481 GGCCGTGGAA GAAAACAGGG CTGCCACGAA CATGCTCTTG GCTGTTTGAA AAGATCCAGC GCAGCTTGAA CTTCAAAAAT 000560
000561 AACTCCATTC ACTATGGTTG CAGTTGGGCT TGGGGAATTT CTCACAATCA AAAGCAGCTG CTTCATCTCA TTTAGCCATT 000640
000641 AGGCTGAGCT CCACAGGCTC GCTGCAGGAT CTTAGAGCCT ACAAGGCCCT GCTAAGAGTA GCCGCGTTTT CCAGCATGCA 000720
000721 GTAGATCAGC GAGTGTTTAC ATTTGTGTTT GGAATGCTCA TGAGTCCTTT GGGGCAAAGA CTGAGTCATT AATCAGAGCT 000800
000801 TTCTATGAAC GTATTGCTGC CCAAGCCTCT GTGAATGTGA GTACGGCCTT GTCCCCTGAG TGACGCTGAA AGAGAGTGAA 000880
000881 GCACATGTGC TCCATAGGAC TGCCACGGCC ACCCCTCTCA TTCACTTTTC CATTCAGCGC TGAGACTAAG TTTAACTCAT 000960
000961 TTTTCTTTTG TTGTGAAAAG AGAATGCACA CAAAAATTCA AATGTTACCA AATCGATATC AGGTTGGAAG CTGATTCCCC 001040
001041 TTGCCTGAGT CCGGGCTGTG TTTGGCGATA CTTGTAAAGA ATGGAATCTG GCTGAGGTGG AGGTGTGTGA CTTTGAGGAC 001120
001121 TAGGTCCAAA GAAGGCATTG TGGTTTCCAT CTTGACTGCT CTTTCCCTTG GATAGCTGAC TCTTAGGGAA GCCACATGCC 001200
001201 ACACCATGAG CAGCTCTGCG GAGAGACCCA TGCAGCAAGG AAATGAGGCT TCCAGTCAAG AGCTGCATGA CTGAATGAAC 001280
001281 TTGTTACCAA AACACCAGGG GTTTGGTCCA GGTCCTTCTG CTCACCGCAT GGAAAGCTCA TCACTGAGAT GACAAGTATT 001360
001361 GCCAAGGAAG GATTTAATCA GGTGCTGCAA CCGAGGAGAT GGGAGCTCAG TCTCAAATCC ATCTTGCTGA CCTACTAAAA 001440
001441 CGAGGGATTT GTATAGCAGG GAAGAAATGA AACAATGTGT AAGAAAACAG CAACTAGGGA GGGGCACGGA AGCAATCATG 001520
001521 ATGAATGAGG GGGCAGCATC TCATTGTCTG AATGCGGTGA TCTGGCCTTA GCTGCCTTCC CGCGGGGCAG GCCTCGGGAC 001600
001601 TGCAGCCCAC CATGCCTGAG CCTTCCCCCT CCTCCGTGGA TTCCTGTGCA GCCGGAGCCT CCCCGACGAG CGCCACCCCC 001680
001681 TGCTCCATGG CGCCCAGTCC CATCGACCGC CTAAGGGCTG AAGAGTGCGG GCGCAAGGCA CCGGGACTGG CAGGCAGCTC 001760
001761 CACCTGCAGC CCCGGTGCGG GATCCACTGG GTGAAGCCAG CTGGACTCCT GAGTCTGGTG GGGCCTTGGA GAACTTTTAT 001840
001841 GTCTAGCTCA GGGATTGTAA ATACACCGAT CGGTACTCTG TATCTAGCTC AAGGTTTGTA AACACACCAA TCAGCACCCT 001920
001921 GTGTCTAGCT CAAGGTTTGT GAGTGCACCA ATCGACACTC TGTATCTAGC TGCTCTGGTG GGGCCTTAGA GAACCTTTGC 002000
002001 GTGGATACTC TGTATCTAAC TAATCTGATA GGGACGTGGA GAACCTTTAT ATCTAGCTCA GGGATTGTAA ACGCACCAAT 002080
002081 CAGCACCCTG TCAAAACAGA CCACTTGGCT CTACCAATCA GCAGGATGTG GGTGGGGCCA GATAAGAGAA TAAAAGCAGG 002160
002161 CTGCCGGAGC CAGCAGTGGC AACCCACTGG GGTCTCCTTC CACACTGTGG AAAGTTTGTT CTTTCGCTCT TTGCAATAAA 002240
002241 TCTTGCTGCT GCTCACTTTT TGGGTCCACA CTGCTCTTAT GAGCTGTAAC ACTCACCGCG AAAATCTGTA GCTTCATTCC 002320
002321 TGAAGCCAGC GAGCCCACGA GCCCACCGGG AAGAACGAAC AACTCCAGAC GTGCCGCCTT AAGAGCTGTA ACACTCACCG 002400
002401 CGAAGGTCTG CAGCTTCACT CCTGAGCCAG CGAGACCACT AACCCACCAG AAGGAAGAAA CTCCGAACAT CAGAAGGAAC 002480
002481 AAACTCCAGA CGCGCCACCT TAAGAGCTGT AACACTCACT GCGAGGGTCC GCGACTTCAT TCTTGAAGTC AGTGAAACCA 002560
002561 AGAATCCACC AATTCCGGAC ACACTATCAC CCATGAAGAG TAGTTACTGT AACATTGTAG CACACTGCAT TACTCAGGTG 002640
002641 TTTGTGGGGT TGCTGATGTG AACAAACCTG CATGGCCAGT TGCATAAAAG TATAGCACAC ACGATTATGT ACAGCCCATA 002720
002721 ATACGTGATA GTGATAATAA ATGACTGTTA CTGGTTTATG T
[back to top]