ENST00000439992.1
Revision as of 10:40, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000439992.1 |
Source |
Gencode19 |
Same with |
lnc-FAM47B-1:1,NONHSAT136608 |
Classification |
intergenic |
Length |
495 nt |
Genomic location |
chrX+:33744625..33960397 |
Exon number |
3 |
Exons |
33744625..33744752,33871732..33871832,33960132..33960397 |
Genome context |
|
Sequence |
000001 GGCTTTTGAT GACGTCGGTG AATCCGTCCT CAGCGGCATT TTCTGGGGTC TCCTGCAGAC CCCTCAGCTG TGCCATAACC 000080
000081 AAACGCCACG TGCCTCAGCT TCCTCACGCC CCAAACTTTG GAAGGCAGGT CACATGGAAT CTACACATGG AAGGACATAG 000160 000161 GCATTGCATG CAGGTATCCG GAATCATTGA TATTGGTCTT AAAATTTGGA AGTTTCCACT TTTGCTAAGA CTGCCATTTA 000240 000241 TAATGAGCCC TACGGAGAGG CCATGTGGCA AGAAGCTGAG GCTGCCAGAG GGAACCTGAG GCCTGCCAGC AACCACATAC 000320 000321 ATGAGTTTGG AAGTTAATTC TTCAGCTTCC TTTGAGTCTT GAGGTAGCTA CAGCCTGGCC AGAACTTGAC TAAACTTCAT 000400 000401 AAGGGACACT GAGCCAGAAA CACCTAACTA AGCAAATTCT GGTTTTATGA CCTTCAGAAA TTGTGTGAAA TAATAAATAT 000480 000481 TTGTTGTTTT CATTA |
Predicted Small Protein
Name | ENST00000439992.1_smProtein_8:298 |
Length | 97 |
Molecular weight | 10728.6058 |
Aromaticity | 0.0625 |
Instability index | 58.778125 |
Isoelectric point | 10.2182006836 |
Runs | 13 |
Runs residual | 0.00118127147766 |
Runs probability | 0.0253556724145 |
Amino acid sequence | MTSVNPSSAAFSGVSCRPLSCAITKRHVPQLPHAPNFGRQVTWNLHMEGHRHCMQVSGII DIGLKIWKFPLLLRLPFIMSPTERPCGKKLRLPEGT |
Secondary structure | LLLLLLLLLLLLLLLLLLLLHHHLLLLLLLLLLLLLLLLEEEEEELLLLLLEEEEEEEEE ELLLEEEELLEELLLLLEELLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |