ENST00000444375.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000444375.1

Source

Gencode19

Same with

lnc-TCTN3-1:5,NONHSAT015792

Classification

intergenic

Length

617 nt

Genomic location

chr10-:97848666..97849956

Exon number

2

Exons

97848666..97849064,97849739..97849956

Genome context

Sequence
000001 ACTGTCATGG CTGCTGTCAG TGAGGGCCCG TAATGGAGAT CGAGTCAAGG GTTGCCCAGG GACACTTAAG AGCCTTCGGC 000080
000081 TTCAAGGAGG CCTCTCAAAG GACAAAGGAT GAGACTGCCT GGCGGCAGAG TGCCCCCCAC AATCGTAGGA ACTGTGTCGC 000160
000161 CGCGCTTCCC GTTAACTTGC CGCTAAGTTT TTCTAGAAAA GTCGCCCTTC TTGCCAGGGG TGTCCTATAG ACTTTGTCAT 000240
000241 GGAGTGAAAC AGAAACAAAT GTGAGTTAAT CATTAACATT TCCTAGTGGT TAAAATTACT TTTTAAGCGC TTAACTGTGT 000320
000321 ATTTTTTAGA TTGAAGATTT CAAATGAAAT TTTGATTTGA CTGAAATATT TAATATGTGA TGAGTTGATA TTAAAATACA 000400
000401 GAAGATTACT ATTTTTATAG AAACAATAAT GTAGAAACTA ATATTTGAAG CAGGTTTACT CCACATACTG TGTTATAATT 000480
000481 TAAATTTTCA CTTAAACTCT CAAAATCAGA AGAGCTGACC TAGTAAGGCT TAAACCTCTA AAACTTGTGG TTTTAACAAG 000560
000561 GCTTAATATA CGTAGTTATA ATAGTTTTTA AAAAAATTGT TATCAAGTTC CTCAGGT
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Predicted Small Protein

Name ENST00000444375.1_smProtein_32:229
Length 66
Molecular weight 7287.3161
Aromaticity 0.0615384615385
Instability index 63.7861538462
Isoelectric point 11.2343139648
Runs 11
Runs residual 0.0189423076923
Runs probability 0.0484334601981
Amino acid sequence MEIESRVAQGHLRAFGFKEASQRTKDETAWRQSAPHNRRNCVAALPVNLPLSFSRKVALL
ARGVL
Secondary structure LLLHHHHHHHHHHHLLLLHHHHLLHHHHHHHHLLLLLLLLEELLLLLLLLLLHHHHHHHH
HLLLL
PRMN -
PiMo -